BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051969
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle...    73   3e-11
ref|XP_003614482.1| Capsid protein [Medicago truncatula] gi|3555...    60   2e-07
ref|XP_003619554.1| Capsid protein [Medicago truncatula] gi|3554...    57   1e-06
ref|XP_003619560.1| Capsid protein [Medicago truncatula] gi|3554...    56   3e-06

>ref|NP_068728.1| putative coat protein [Soybean chlorotic mottle virus]
           gi|18266819|sp|P15627.2|CAPSD_SOCMV RecName: Full=Capsid
           protein; Short=CP; AltName: Full=Coat protein
           gi|11322952|emb|CAC16944.1| putative coat protein
           [Soybean chlorotic mottle virus]
          Length = 441

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 2/136 (1%)
 Frame = +2

Query: 5   KWTKVPETYIPKISVMTPNSEILDLDCITNTEDRI*EWGNQMSIQIQLTEELSKLEPGEL 184
           K+ K+P+ Y+P     T    +LD+DC+ NTE  I EW N  SI I + EEL  L   + 
Sbjct: 90  KYQKIPKEYVPAHQT-TSTIGVLDIDCVANTEKIIKEWFNHHSILITINEELKNLSSLDT 148

Query: 185 FSYMMHKTNGNVYRFLEALTIEEKAIILSQNALTT--FNNLLARILEEFVGKDPNSEKSK 358
           F Y+++KT G  + +L  L  E  + I +          NLL   L EFVG+    E S+
Sbjct: 149 FYYLVYKTRGIAHAYLSNLPSEVLSRIPADRKQVDDWVYNLL---LREFVGRLERPE-SE 204

Query: 359 LAFRQTAYWHLNNLRI 406
            AF Q  Y+ L NL I
Sbjct: 205 EAFSQNNYYKLINLEI 220


>ref|XP_003614482.1| Capsid protein [Medicago truncatula] gi|355515817|gb|AES97440.1|
           Capsid protein [Medicago truncatula]
          Length = 298

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 38/134 (28%), Positives = 67/134 (50%)
 Frame = +2

Query: 5   KWTKVPETYIPKISVMTPNSEILDLDCITNTEDRI*EWGNQMSIQIQLTEELSKLEPGEL 184
           K+ K+P  Y P  +       ILD+DC   T   + +W N  ++ +QL E+L  L   + 
Sbjct: 37  KFQKIPHYYEPSQNPFQGQG-ILDIDCSIVTAKDLRDWYNTNNVLVQLNEDLRNLSVTDT 95

Query: 185 FSYMMHKTNGNVYRFLEALTIEEKAIILSQNALTTFNNLLARILEEFVGKDPNSEKSKLA 364
           F+Y+ +KT  N ++++  L  +  A I    +L T + +   ++ EF G   ++ +SK  
Sbjct: 96  FNYLQYKTRRNAFKYISTLPPKVMATIPLTGSLVT-DWVYGLLVREFKGW-RDTIQSKTT 153

Query: 365 FRQTAYWHLNNLRI 406
           F     W + NL+I
Sbjct: 154 FSDQNLWKITNLKI 167


>ref|XP_003619554.1| Capsid protein [Medicago truncatula] gi|355494569|gb|AES75772.1|
           Capsid protein [Medicago truncatula]
          Length = 306

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 35/139 (25%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
 Frame = +2

Query: 2   GKWTKVPETYIPKISVMTPNSEILDLDCITNTEDRI*EWGNQMSIQIQLTEELSKLEPGE 181
           GKWTK+ + + P       + ++L+LDC+ N E+ +  W N M + ++  ++ SK+   +
Sbjct: 37  GKWTKISDEFKPHYEE-GKSKKLLNLDCVRNPEEILERWSNNMIMLLETDDKFSKVNLMD 95

Query: 182 LFSYMMHKTNGNVYRFLEALTIE--EKAIILSQNALTTFNNLLARILEEFVGKDPNSEKS 355
           + + + ++T  NV + L ++  E  ++   +++N       ++  I +EF+  +    K+
Sbjct: 96  VKNLLAYRTTWNVLKKLTSIEDETWQQYARMTENNQQFAKLIIELIYKEFIWFNILEHKA 155

Query: 356 KL--AFRQTAYWHLNNLRI 406
           K+    R+ A  HLNN++I
Sbjct: 156 KVNKQLRERAKAHLNNMQI 174


>ref|XP_003619560.1| Capsid protein [Medicago truncatula] gi|355494575|gb|AES75778.1|
           Capsid protein [Medicago truncatula]
          Length = 178

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 34/138 (24%), Positives = 73/138 (52%), Gaps = 4/138 (2%)
 Frame = +2

Query: 2   GKWTKVPETYIPKISVMTPNSEILDLDCITNTEDRI*EWGNQMSIQIQLTEELSKLEPGE 181
           GKWTK+ + + P       + ++L+LDC+ N E+ +  W N M + +   E  SK+   +
Sbjct: 37  GKWTKISDEFKPHYEE-GKSKKLLNLDCVRNPEEILERWSNNMIMLLATDERFSKVNLMD 95

Query: 182 LFSYMMHKTNGNVYRFLEALTIE--EKAIILSQNALTTFNNLLARILEEFVGKDPNSEKS 355
           + + + ++T GNV + L ++  E  ++   +++N       ++  I ++F+G +    K+
Sbjct: 96  VKNLIAYRTTGNVLKNLTSIEDETWQQYARMTENNQQFAKLIIELIYKDFIGFNILEHKA 155

Query: 356 KL--AFRQTAYWHLNNLR 403
           K+     + A  HL+N++
Sbjct: 156 KVNKQLTERAKAHLHNMQ 173