BLASTX nr result

ID: Atractylodes22_contig00051940 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051940
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containi...   115   3e-24
emb|CBI27232.3| unnamed protein product [Vitis vinifera]              115   3e-24
ref|XP_002528143.1| pentatricopeptide repeat-containing protein,...   111   7e-23
ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|2...   100   1e-19

>ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/71 (74%), Positives = 60/71 (84%)
 Frame = +3

Query: 21  FSSLIHGLCNDGSVEEGLKLFNKMLCAGSGSQPDIVTYNILFNALCKHGRVSHAIDLLNC 200
           +SS+IHGLCN GSVE GLKLFN+MLC  S SQPD+VTYNIL  ALCK   +SHAIDLLN 
Sbjct: 490 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNS 549

Query: 201 MLDRGCDPDLV 233
           MLDRGC+PDL+
Sbjct: 550 MLDRGCNPDLI 560


>emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  115 bits (289), Expect = 3e-24
 Identities = 53/71 (74%), Positives = 60/71 (84%)
 Frame = +3

Query: 21  FSSLIHGLCNDGSVEEGLKLFNKMLCAGSGSQPDIVTYNILFNALCKHGRVSHAIDLLNC 200
           +SS+IHGLCN GSVE GLKLFN+MLC  S SQPD+VTYNIL  ALCK   +SHAIDLLN 
Sbjct: 506 YSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNS 565

Query: 201 MLDRGCDPDLV 233
           MLDRGC+PDL+
Sbjct: 566 MLDRGCNPDLI 576


>ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532441|gb|EEF34234.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 653

 Score =  111 bits (277), Expect = 7e-23
 Identities = 50/71 (70%), Positives = 59/71 (83%)
 Frame = +3

Query: 21  FSSLIHGLCNDGSVEEGLKLFNKMLCAGSGSQPDIVTYNILFNALCKHGRVSHAIDLLNC 200
           +SS+I GLC+ GSVEE LKL+N+MLC    SQPD++TYNILFNALCK   +S A+DLLN 
Sbjct: 499 YSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNS 558

Query: 201 MLDRGCDPDLV 233
           MLDRGCDPDLV
Sbjct: 559 MLDRGCDPDLV 569


>ref|XP_002304600.1| predicted protein [Populus trichocarpa] gi|222842032|gb|EEE79579.1|
           predicted protein [Populus trichocarpa]
          Length = 641

 Score =  101 bits (252), Expect = 6e-20
 Identities = 47/71 (66%), Positives = 56/71 (78%)
 Frame = +3

Query: 21  FSSLIHGLCNDGSVEEGLKLFNKMLCAGSGSQPDIVTYNILFNALCKHGRVSHAIDLLNC 200
           + S+I+GL N G VE+ L+L+N+MLC    SQPD+VTYNIL NALCK   +S AIDLLN 
Sbjct: 487 YGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNS 546

Query: 201 MLDRGCDPDLV 233
           MLDRGCDPDLV
Sbjct: 547 MLDRGCDPDLV 557


>ref|XP_002297917.1| predicted protein [Populus trichocarpa] gi|222845175|gb|EEE82722.1|
           predicted protein [Populus trichocarpa]
          Length = 670

 Score =  100 bits (249), Expect = 1e-19
 Identities = 46/71 (64%), Positives = 56/71 (78%)
 Frame = +3

Query: 21  FSSLIHGLCNDGSVEEGLKLFNKMLCAGSGSQPDIVTYNILFNALCKHGRVSHAIDLLNC 200
           +SS+I+GL   G VE+ ++L+N+MLC G  SQPD+VTYNIL N LCK   +S AIDLLN 
Sbjct: 517 YSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNS 576

Query: 201 MLDRGCDPDLV 233
           MLDRGCDPDLV
Sbjct: 577 MLDRGCDPDLV 587


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