BLASTX nr result

ID: Atractylodes22_contig00051861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051861
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein...    70   2e-10
ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycin...    65   4e-09
ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinif...    63   3e-08
ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata sub...    62   4e-08
ref|XP_002863970.1| predicted protein [Arabidopsis lyrata subsp....    62   4e-08

>ref|XP_004158685.1| PREDICTED: putative F-box/LRR-repeat protein 23-like [Cucumis
           sativus]
          Length = 273

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/79 (41%), Positives = 56/79 (70%)
 Frame = -2

Query: 304 DEVARAIGKHLPELEHLKLFRNSMSDIGLLSILDSYCRLKSLDLRRCQYINFMQVHRERC 125
           DE A AI + +P L HL++  NS+++ GL ++LDS   L+SLDLR+C Y++F +  +++C
Sbjct: 181 DEDALAIAETMPNLHHLEIVGNSITNFGLHALLDSCSGLQSLDLRKCMYLDFDEHLKKKC 240

Query: 124 CQ*IQCLKLPADYLEGCTY 68
            Q I+ L+LP + ++G T+
Sbjct: 241 YQRIKTLRLPYEPVDGSTF 259


>ref|XP_003546075.1| PREDICTED: F-box protein SKIP19-like [Glycine max]
          Length = 318

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/79 (43%), Positives = 50/79 (63%)
 Frame = -2

Query: 304 DEVARAIGKHLPELEHLKLFRNSMSDIGLLSILDSYCRLKSLDLRRCQYINFMQVHRERC 125
           DE A AI + +P L HL+LF N +++ GLL+ILD    L+SLDLR+C  +N      +RC
Sbjct: 188 DEEAFAIAETMPTLHHLQLFGNKLTNEGLLAILDGCPHLESLDLRQCFNVNLAGSLGKRC 247

Query: 124 CQ*IQCLKLPADYLEGCTY 68
            + I+ L+LP D  + C +
Sbjct: 248 AEQIKELRLPCDPTDDCPF 266


>ref|XP_002274093.1| PREDICTED: F-box protein SKIP19 [Vitis vinifera]
           gi|147853333|emb|CAN82327.1| hypothetical protein
           VITISV_041807 [Vitis vinifera]
           gi|297740788|emb|CBI30970.3| unnamed protein product
           [Vitis vinifera]
          Length = 321

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/72 (44%), Positives = 48/72 (66%)
 Frame = -2

Query: 304 DEVARAIGKHLPELEHLKLFRNSMSDIGLLSILDSYCRLKSLDLRRCQYINFMQVHRERC 125
           DE A AI +++P L+ L+LF N +++ GLL+ILD  C L+SLDLR+C  +N      +RC
Sbjct: 187 DEEALAIAQNMPGLKSLQLFGNKLTNNGLLAILDGCCHLESLDLRQCFNVNLGGNLAKRC 246

Query: 124 CQ*IQCLKLPAD 89
            + I+ L+ P D
Sbjct: 247 AEQIKILRYPND 258


>ref|XP_002874842.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320679|gb|EFH51101.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 308

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/72 (43%), Positives = 48/72 (66%)
 Frame = -2

Query: 304 DEVARAIGKHLPELEHLKLFRNSMSDIGLLSILDSYCRLKSLDLRRCQYINFMQVHRERC 125
           D+ A AI + +P+L HL+LF N +SD GL +ILDS   L+ LDLRRC  +N +   ++RC
Sbjct: 181 DDDALAIAETMPKLRHLQLFGNGLSDTGLNAILDSCLNLEHLDLRRCFNVNLIGDLQKRC 240

Query: 124 CQ*IQCLKLPAD 89
            + ++ ++ P D
Sbjct: 241 SERVKVVRHPND 252


>ref|XP_002863970.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309805|gb|EFH40229.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 326

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 31/72 (43%), Positives = 48/72 (66%)
 Frame = -2

Query: 304 DEVARAIGKHLPELEHLKLFRNSMSDIGLLSILDSYCRLKSLDLRRCQYINFMQVHRERC 125
           DE+A AI + +P L HL+L RN +SD GL SILD+  +L+ LD+R+C  +N +   +++C
Sbjct: 185 DEIALAIAETMPGLRHLQLLRNGLSDAGLNSILDNCPKLEHLDIRQCFNVNLVGDWKKQC 244

Query: 124 CQ*IQCLKLPAD 89
              I+ L+ P D
Sbjct: 245 YDRIKVLRHPND 256


Top