BLASTX nr result

ID: Atractylodes22_contig00051859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051859
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    92   3e-17
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    77   2e-12
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    76   2e-12
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    76   3e-12
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    75   4e-12

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 45/80 (56%), Positives = 57/80 (71%)
 Frame = +3

Query: 36   PVFYGPFEVLNRIGKVA*RLKLPTQVHIHPVFHVSKLRKAIGNCFSSVVIPPQLTEDGVL 215
            P FYGPF VL RIG+VA +L+LP    +HPVFH+S+L+KA+G+  SS  IPPQLT D VL
Sbjct: 1412 PRFYGPFSVLKRIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQSSPTIPPQLTNDLVL 1471

Query: 216  EVEPEELLQCRTSPTGALEV 275
            + +PE LL  R+ P    EV
Sbjct: 1472 DAQPESLLNIRSHPQKPAEV 1491


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/71 (56%), Positives = 45/71 (63%)
 Frame = +3

Query: 36   PVFYGPFEVLNRIGKVA*RLKLPTQVHIHPVFHVSKLRKAIGNCFSSVVIPPQLTEDGVL 215
            P FYGPF VL RIG  A +L+LP    IHPVFHVS L+K +GN      IPP +  D  L
Sbjct: 1479 PRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTPVLPTIPPHIDVDMEL 1538

Query: 216  EVEPEELLQCR 248
             VEPEELL  R
Sbjct: 1539 VVEPEELLDVR 1549


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 39/74 (52%), Positives = 47/74 (63%)
 Frame = +3

Query: 36   PVFYGPFEVLNRIGKVA*RLKLPTQVHIHPVFHVSKLRKAIGNCFSSVVIPPQLTEDGVL 215
            P +YGPF VL RIG VA  L LP    IHPVFH+S+LRKA+G      V+PP LT D VL
Sbjct: 1248 PRYYGPFPVLKRIGTVAYELDLPPHSKIHPVFHISQLRKAVGTAPVFPVLPPLLTTDLVL 1307

Query: 216  EVEPEELLQCRTSP 257
               P ++L  R +P
Sbjct: 1308 PSSPSQVLGIRPNP 1321


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 38/75 (50%), Positives = 48/75 (64%)
 Frame = +3

Query: 24   LSWQPVFYGPFEVLNRIGKVA*RLKLPTQVHIHPVFHVSKLRKAIGNCFSSVVIPPQLTE 203
            L   P FYGP+ VL +IG VA RL+LP +  IHPVFHVS L++ +G     VV  P   +
Sbjct: 1351 LKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPXDK 1410

Query: 204  DGVLEVEPEELLQCR 248
            DGV+  EPEE+L  R
Sbjct: 1411 DGVIRXEPEEILHRR 1425


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/75 (50%), Positives = 48/75 (64%)
 Frame = +3

Query: 24   LSWQPVFYGPFEVLNRIGKVA*RLKLPTQVHIHPVFHVSKLRKAIGNCFSSVVIPPQLTE 203
            L   P FYGP+ VL +IG VA RL+LP +  IHPVFHVS L++ +G     VV  P   +
Sbjct: 1284 LKLSPRFYGPYRVLEKIGTVAYRLELPPEAKIHPVFHVSCLKEKLGERHQLVVTLPPADK 1343

Query: 204  DGVLEVEPEELLQCR 248
            DGV+  EPEE+L  R
Sbjct: 1344 DGVIRPEPEEILHRR 1358


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