BLASTX nr result

ID: Atractylodes22_contig00051844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051844
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18266.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-l...    64   2e-08
ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254...    62   5e-08
emb|CAN79195.1| hypothetical protein VITISV_000237 [Vitis vinifera]    62   5e-08
gb|AFL55357.1| Fanconia anemia complementation group M-like prot...    57   1e-06

>emb|CBI18266.3| unnamed protein product [Vitis vinifera]
          Length = 1448

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 53/123 (43%), Positives = 70/123 (56%), Gaps = 3/123 (2%)
 Frame = -3

Query: 362  KFGDT-KNRNLLDKEEIVGHTSGSGRSCAPLDHASDKHGRGGKKLLNDARVFIXXXXXXX 186
            K+GDT + RN+   +E     SG+    + +    +KH RG +K +++ R FI       
Sbjct: 1189 KYGDTGQRRNMKSMKENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVRAFIEEEAEVS 1248

Query: 185  XXXXXXXXXXDRQD--SYGGSFIDDRINPTLASTQAEAAECDMMAIYRRSLLSQSPISRT 12
                      D Q+  SY  SFIDDRI+PT  STQAE +  DMMAIYRRSLLSQSP+ R 
Sbjct: 1249 SEAEVSDDEEDDQNNNSYDDSFIDDRIDPTATSTQAEDSRSDMMAIYRRSLLSQSPVVRQ 1308

Query: 11   PHF 3
            P+F
Sbjct: 1309 PNF 1311


>ref|XP_003530407.1| PREDICTED: ATP-dependent DNA helicase MPH1-like [Glycine max]
          Length = 1262

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 43/113 (38%), Positives = 57/113 (50%)
 Frame = -3

Query: 362  KFGDTKNRNLLDKEEIVGHTSGSGRSCAPLDHASDKHGRGGKKLLNDARVFIXXXXXXXX 183
            K  DT+        ++   T+   +  +  + A  KHG+G +K  ++ R FI        
Sbjct: 978  KAEDTERNMNQKNNKLFASTANFLKPSSASNPAQYKHGQGKRKSTHNVRDFIEEEAEVSS 1037

Query: 182  XXXXXXXXXDRQDSYGGSFIDDRINPTLASTQAEAAECDMMAIYRRSLLSQSP 24
                     D + S   SFIDDR NPT AS Q EA+  DMMAIYRRSLLSQ+P
Sbjct: 1038 DGYVSNDEDDEEGSSFDSFIDDRTNPTAAS-QPEASRMDMMAIYRRSLLSQTP 1089


>ref|XP_003634544.1| PREDICTED: uncharacterized protein LOC100254868 [Vitis vinifera]
          Length = 982

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -3

Query: 362  KFGDT-KNRNLLDKEEIVGHTSGSGRSCAPLDHASDKHGRGGKKLLNDARVFIXXXXXXX 186
            K+GDT + RN+   +E     SG+    + +    +KH RG +K +++ R FI       
Sbjct: 874  KYGDTGQRRNMKSMKENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVRAFIEEEAEVS 933

Query: 185  XXXXXXXXXXDRQD--SYGGSFIDDRINPTLASTQAEAAECDMMAIYR 48
                      D Q+  SY  SFIDDRI+PT  STQAE +  DMMAIYR
Sbjct: 934  SEAEVSDDEEDDQNNNSYDDSFIDDRIDPTATSTQAEDSRSDMMAIYR 981


>emb|CAN79195.1| hypothetical protein VITISV_000237 [Vitis vinifera]
          Length = 808

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/108 (38%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
 Frame = -3

Query: 362  KFGDT-KNRNLLDKEEIVGHTSGSGRSCAPLDHASDKHGRGGKKLLNDARVFIXXXXXXX 186
            K+GDT + RN+   +E     SG+    + +    +KH RG +K +++ R FI       
Sbjct: 700  KYGDTGQRRNMKSMKENSIDPSGNLAETSSIIPIRNKHNRGKQKPVDNVRAFIEEEAEVS 759

Query: 185  XXXXXXXXXXDRQD--SYGGSFIDDRINPTLASTQAEAAECDMMAIYR 48
                      D Q+  SY  SFIDDRI+PT  STQAE +  DMMAIYR
Sbjct: 760  SEAEVSDDEEDDQNNNSYDDSFIDDRIDPTATSTQAEDSRSDMMAIYR 807


>gb|AFL55357.1| Fanconia anemia complementation group M-like protein [Arabidopsis
            thaliana]
          Length = 1344

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
 Frame = -3

Query: 257  KHGRGGKKLL--NDARVFIXXXXXXXXXXXXXXXXXD--RQDSYGGSFIDDRINPTLAST 90
            KH RG KK++  +D +VFI                 +    DS+  SFIDD   PT A+T
Sbjct: 1087 KHIRGKKKMIMDDDVQVFIDEEAEVSSGAEMSADENEDVTGDSFEDSFIDDGTMPT-ANT 1145

Query: 89   QAEAAECDMMAIYRRSLLSQSPI 21
            QAE+ + DMMA+YRRSLLSQSP+
Sbjct: 1146 QAESGKVDMMAVYRRSLLSQSPL 1168


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