BLASTX nr result

ID: Atractylodes22_contig00051710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051710
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]   108   3e-22
ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containi...   108   5e-22
ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20
ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20
ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containi...   102   3e-20

>emb|CAN68962.1| hypothetical protein VITISV_019277 [Vitis vinifera]
          Length = 676

 Score =  108 bits (271), Expect = 3e-22
 Identities = 53/107 (49%), Positives = 70/107 (65%)
 Frame = +1

Query: 1   ALSGHVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTY 180
           A+ G  P+AR+LFD L   S  ++N MI++YT  GL  DAL +FV+M  SGR  PD  TY
Sbjct: 67  AMCGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTY 126

Query: 181 PFVVKACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGE 321
           PFV+KAC    + + G L+H   + SG DS+ FV NSL+AMY + GE
Sbjct: 127 PFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGE 173



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/106 (33%), Positives = 54/106 (50%)
 Frame = +1

Query: 10  GHVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTYPFV 189
           G +  AR++FD + +R+  ++N MI  Y + G + +AL +F  M   G  +PD  T   V
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKG-IEPDCATVVSV 230

Query: 190 VKACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGEND 327
           +  C+ L   + G  VH L+    +  +  V NSLL MY   G  D
Sbjct: 231 LPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276


>ref|XP_002279032.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39350
           [Vitis vinifera] gi|296082987|emb|CBI22288.3| unnamed
           protein product [Vitis vinifera]
          Length = 676

 Score =  108 bits (270), Expect = 5e-22
 Identities = 53/107 (49%), Positives = 70/107 (65%)
 Frame = +1

Query: 1   ALSGHVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTY 180
           A+ G  P+AR+LFD L   S  ++N MI++YT  GL  DAL +FV+M  SGR  PD  TY
Sbjct: 67  AMFGCAPHARKLFDELRNPSLFSWNAMIRMYTNSGLSYDALGLFVQMLASGRRWPDNYTY 126

Query: 181 PFVVKACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGE 321
           PFV+KAC    + + G L+H   + SG DS+ FV NSL+AMY + GE
Sbjct: 127 PFVIKACGDYLLPEMGALIHARTVMSGFDSDAFVQNSLMAMYMNCGE 173



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/106 (33%), Positives = 54/106 (50%)
 Frame = +1

Query: 10  GHVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTYPFV 189
           G +  AR++FD + +R+  ++N MI  Y + G + +AL +F  M   G  +PD  T   V
Sbjct: 172 GEMEVARRVFDLMRERTLVSWNTMINGYFKNGCVKEALMVFDWMIGKG-IEPDCATVVSV 230

Query: 190 VKACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGEND 327
           +  C+ L   + G  VH L+    +  +  V NSLL MY   G  D
Sbjct: 231 LPVCSYLKELEVGRRVHALVEVKNLGEDISVWNSLLDMYAKCGNMD 276


>ref|XP_004137281.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 787

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/107 (48%), Positives = 68/107 (63%)
 Frame = +1

Query: 1   ALSGHVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTY 180
           A  G VP AR+LFD L   S   +N +IK+Y +KG   DAL +F  M  SG+  PD  T+
Sbjct: 128 AFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKCWPDKYTF 187

Query: 181 PFVVKACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGE 321
           P V+KAC+ +SM   G+L+HG  + SG  SN FV NSLLAMY + G+
Sbjct: 188 PLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK 234


>ref|XP_004154781.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Cucumis sativus]
          Length = 709

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/107 (48%), Positives = 68/107 (63%)
 Frame = +1

Query: 1   ALSGHVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTY 180
           A  G VP AR+LFD L   S   +N +IK+Y +KG   DAL +F  M  SG+  PD  T+
Sbjct: 128 AFCGCVPLARKLFDDLSDPSLFLWNAIIKMYVDKGFHFDALRVFDSMICSGKFWPDKYTF 187

Query: 181 PFVVKACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGE 321
           P V+KAC+ +SM   G+L+HG  + SG  SN FV NSLLAMY + G+
Sbjct: 188 PLVIKACSVMSMLNVGVLIHGRALVSGFSSNMFVQNSLLAMYMNCGK 234


>ref|XP_003516575.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39350-like [Glycine max]
          Length = 666

 Score =  102 bits (254), Expect = 3e-20
 Identities = 51/105 (48%), Positives = 66/105 (62%)
 Frame = +1

Query: 13  HVPYARQLFDGLHQRSKRAYNCMIKLYTEKGLMNDALEIFVEMFKSGRTKPDALTYPFVV 192
           H  YA  LFD L Q    ++N M+++Y + G   DAL +FVEM  SGRT PD  TYP V+
Sbjct: 61  HASYASHLFDKLSQPCLFSWNAMMRMYVQIGRPFDALNLFVEMLGSGRTLPDKFTYPVVI 120

Query: 193 KACATLSMSQFGLLVHGLIISSGVDSNTFVGNSLLAMYTSFGEND 327
           KAC  LS+   G+ +HG     G DS+TFV N+LLAMY + GE +
Sbjct: 121 KACGDLSLIDVGVGIHGQTFKFGYDSDTFVQNTLLAMYMNAGEKE 165


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