BLASTX nr result

ID: Atractylodes22_contig00051665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051665
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containi...   145   4e-33
ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containi...   144   1e-32
emb|CBI37903.3| unnamed protein product [Vitis vinifera]              138   5e-31
ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containi...   138   5e-31
ref|XP_002528283.1| pentatricopeptide repeat-containing protein,...   137   1e-30

>ref|XP_004172296.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/96 (66%), Positives = 81/96 (84%)
 Frame = +1

Query: 13  VFKLLGDKRDTILWNTMISAFAQHGHGEAAIELFSDMVRSQVKLDRITFTIVLNACSHSG 192
           VF L+G+K+D ++WNTMISA AQ+GHGE A+++F+DMV S +K DRITF ++L+ACSHSG
Sbjct: 384 VFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSG 443

Query: 193 LVQEGLHFFNTTMHEHNIIPDQEHYACLIDLLGRAG 300
           LVQEGL FF    ++H + PDQEHYACLIDLLGRAG
Sbjct: 444 LVQEGLRFFKAMTYDHGVFPDQEHYACLIDLLGRAG 479


>ref|XP_004137053.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g21090-like [Cucumis sativus]
          Length = 611

 Score =  144 bits (362), Expect = 1e-32
 Identities = 63/96 (65%), Positives = 81/96 (84%)
 Frame = +1

Query: 13  VFKLLGDKRDTILWNTMISAFAQHGHGEAAIELFSDMVRSQVKLDRITFTIVLNACSHSG 192
           VF L+G+K+D ++WNTMISA AQ+GHGE A+++F+DMV S +K DRITF ++L+ACSHSG
Sbjct: 384 VFHLMGNKQDVVVWNTMISALAQNGHGEKAMQMFNDMVESGLKPDRITFIVILSACSHSG 443

Query: 193 LVQEGLHFFNTTMHEHNIIPDQEHYACLIDLLGRAG 300
           LVQEGL FF    ++H + PDQEHY+CLIDLLGRAG
Sbjct: 444 LVQEGLRFFKAMTYDHGVFPDQEHYSCLIDLLGRAG 479


>emb|CBI37903.3| unnamed protein product [Vitis vinifera]
          Length = 516

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/100 (63%), Positives = 80/100 (80%)
 Frame = +1

Query: 1   LAQLVFKLLGDKRDTILWNTMISAFAQHGHGEAAIELFSDMVRSQVKLDRITFTIVLNAC 180
           + + VF L+G+K D +LWNT+ISA AQHG GE AI++  DMVRS  K D+ITF ++LNAC
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC 436

Query: 181 SHSGLVQEGLHFFNTTMHEHNIIPDQEHYACLIDLLGRAG 300
           SHSGLVQ+GL+FF +   ++ I+P QEHYACLIDLLGRAG
Sbjct: 437 SHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAG 476


>ref|XP_002277549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g21090
           [Vitis vinifera]
          Length = 612

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/100 (63%), Positives = 80/100 (80%)
 Frame = +1

Query: 1   LAQLVFKLLGDKRDTILWNTMISAFAQHGHGEAAIELFSDMVRSQVKLDRITFTIVLNAC 180
           + + VF L+G+K D +LWNT+ISA AQHG GE AI++  DMVRS  K D+ITF ++LNAC
Sbjct: 377 IGRKVFDLMGNKLDVVLWNTIISALAQHGCGEEAIQMLDDMVRSGAKPDKITFVVILNAC 436

Query: 181 SHSGLVQEGLHFFNTTMHEHNIIPDQEHYACLIDLLGRAG 300
           SHSGLVQ+GL+FF +   ++ I+P QEHYACLIDLLGRAG
Sbjct: 437 SHSGLVQQGLNFFESMSCDYGIVPSQEHYACLIDLLGRAG 476


>ref|XP_002528283.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532320|gb|EEF34121.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 602

 Score =  137 bits (344), Expect = 1e-30
 Identities = 63/100 (63%), Positives = 79/100 (79%)
 Frame = +1

Query: 1   LAQLVFKLLGDKRDTILWNTMISAFAQHGHGEAAIELFSDMVRSQVKLDRITFTIVLNAC 180
           + +LVF L+GDK D +LWNT+IS+ AQHG G+ AI++F DMVR  +K DRIT  ++LNAC
Sbjct: 368 VGRLVFDLMGDKWDVVLWNTIISSLAQHGRGQEAIQMFDDMVRLGMKPDRITLIVLLNAC 427

Query: 181 SHSGLVQEGLHFFNTTMHEHNIIPDQEHYACLIDLLGRAG 300
           SHSGLVQEGL  + +    H +IP+QEHYACLIDLLGRAG
Sbjct: 428 SHSGLVQEGLRLYESITSCHGVIPNQEHYACLIDLLGRAG 467


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