BLASTX nr result

ID: Atractylodes22_contig00051613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051613
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]               80   6e-16
gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indi...    74   9e-12
gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]      74   1e-11
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...    72   4e-11
gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group...    66   1e-10

>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score = 80.1 bits (196), Expect(2) = 6e-16
 Identities = 37/76 (48%), Positives = 52/76 (68%)
 Frame = -2

Query: 228 ISFLSNDQLISCNKDSRLTVCHACQLG*HC*LPFSPSINKTYAPFDILHTDL*TSPIVNL 49
           +S L +   ISCNKD    +CHACQLG H  LPFS S ++    FD++H DL  SPIV++
Sbjct: 607 LSQLVSSSAISCNKDDDYHLCHACQLGRHTRLPFSTSTSRATNNFDLIHCDLWASPIVSV 666

Query: 48  MGIRYYLLLLDDYTNF 1
            G +YYL++LDD +++
Sbjct: 667 SGYKYYLIILDDRSHY 682



 Score = 28.5 bits (62), Expect(2) = 6e-16
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = -3

Query: 272 ASLWHNRLGHPGSILLVSLV 213
           ASLWH RLGH G   L  LV
Sbjct: 592 ASLWHRRLGHLGREALSQLV 611


>gb|EEC82022.1| hypothetical protein OsI_25984 [Oryza sativa Indica Group]
          Length = 964

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 6/86 (6%)
 Frame = -2

Query: 240 WLNIISFLSNDQLISCNKDS------RLTVCHACQLG*HC*LPFSPSINKTYAPFDILHT 79
           W + +  L ++ L    + S       L+VCHACQLG HC LPF+ S  +  + FD++H 
Sbjct: 698 WHHRLGHLGSEALTRLARSSVIPPYRELSVCHACQLGRHCRLPFNTSFTRATSNFDLIHC 757

Query: 78  DL*TSPIVNLMGIRYYLLLLDDYTNF 1
           DL TSP+ ++ G +YYL++LDD ++F
Sbjct: 758 DLWTSPVSSVSGYKYYLVILDDCSHF 783


>gb|AAT93988.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1480

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/84 (40%), Positives = 55/84 (65%)
 Frame = -2

Query: 252 IGPPWLNIISFLSNDQLISCNKDSRLTVCHACQLG*HC*LPFSPSINKTYAPFDILHTDL 73
           +G P    +  L    ++SC + +   +CHAC LG H  L FS S + T +PF+++H D+
Sbjct: 494 LGHPSPAAVQTLHKLAILSCTRSNN-KLCHACHLGKHTRLSFSKSSSSTSSPFELVHCDV 552

Query: 72  *TSPIVNLMGIRYYLLLLDDYTNF 1
            TSP+++L G +YYL++LDD+T+F
Sbjct: 553 WTSPVLSLSGFKYYLVVLDDFTHF 576


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 34/84 (40%), Positives = 55/84 (65%)
 Frame = -2

Query: 252 IGPPWLNIISFLSNDQLISCNKDSRLTVCHACQLG*HC*LPFSPSINKTYAPFDILHTDL 73
           +G P    I  L    ++ C K    ++CHAC+LG H  LPFS S + T +PF+++H D+
Sbjct: 495 LGHPSSAAIQTLHKLAILPCTKIDH-SLCHACKLGKHTRLPFSRSQSSTSSPFELVHCDV 553

Query: 72  *TSPIVNLMGIRYYLLLLDDYTNF 1
            TSP+++  G +YYL++LDD+++F
Sbjct: 554 WTSPVLSTSGFKYYLVVLDDFSHF 577


>gb|AAU10819.1| putative polyprotein [Oryza sativa Japonica Group]
           gi|53981353|gb|AAV24907.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 1679

 Score = 66.2 bits (160), Expect(2) = 1e-10
 Identities = 28/57 (49%), Positives = 41/57 (71%)
 Frame = -2

Query: 171 VCHACQLG*HC*LPFSPSINKTYAPFDILHTDL*TSPIVNLMGIRYYLLLLDDYTNF 1
           VCHACQLG H  LPF+ S ++    F++ H DL TSP+V+  G +YYL++LDD +++
Sbjct: 727 VCHACQLGRHVRLPFASSTSRASTNFELFHCDLWTSPVVSASGFKYYLVILDDCSHY 783



 Score = 24.6 bits (52), Expect(2) = 1e-10
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 293 LVCVTSLASLWHNRLGHPGSILLVSLVMI 207
           L+  +S   LWH RLGH G   L  L  +
Sbjct: 688 LLANSSTDLLWHRRLGHLGHDALNRLAAV 716


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