BLASTX nr result

ID: Atractylodes22_contig00051578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051578
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent R...    69   4e-10
ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ...    66   3e-09
ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent R...    62   6e-08

>ref|XP_002298050.1| predicted protein [Populus trichocarpa] gi|222845308|gb|EEE82855.1|
           predicted protein [Populus trichocarpa]
          Length = 784

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/74 (55%), Positives = 54/74 (72%), Gaps = 1/74 (1%)
 Frame = +2

Query: 155 SRAALGKYDIKKTKRIPLKLVELENDLSLHVQAIRNEFN-KRKMAEKDTIADDDDSILSP 331
           SR ALGKYD+KKT+R+P K +E +ND +  V+ IR E   K+K+A  D   +D+DSILS 
Sbjct: 255 SRDALGKYDVKKTRRVPSKELE-KNDFANEVELIRYELGRKKKLAGNDGDNEDEDSILSD 313

Query: 332 KRFDECNVSQLTIK 373
           KRFDEC +S LT+K
Sbjct: 314 KRFDECGLSPLTVK 327


>ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1|
           predicted protein [Populus trichocarpa]
          Length = 798

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/74 (54%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
 Frame = +2

Query: 155 SRAALGKYDIKKTKRIPLKLVELENDLSLHVQAIRNEFN-KRKMAEKDTIADDDDSILSP 331
           SRAALGKYD+KKT+R+PLK ++ +ND +  V+ IR E   K+K A  +   +++DSILS 
Sbjct: 269 SRAALGKYDMKKTRRVPLKELD-KNDFANEVELIRYELGRKKKFAGNEGDKEEEDSILSE 327

Query: 332 KRFDECNVSQLTIK 373
           KRFDEC +S LT+K
Sbjct: 328 KRFDECGLSPLTVK 341


>ref|XP_002276972.2| PREDICTED: probable DEAD-box ATP-dependent RNA helicase 48-like
           [Vitis vinifera] gi|297742558|emb|CBI34707.3| unnamed
           protein product [Vitis vinifera]
          Length = 754

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/73 (46%), Positives = 52/73 (71%)
 Frame = +2

Query: 155 SRAALGKYDIKKTKRIPLKLVELENDLSLHVQAIRNEFNKRKMAEKDTIADDDDSILSPK 334
           S AALGKYD+K  +R+  K ++  +D S  ++ IR+E +++ +AE++    D++SILS K
Sbjct: 227 SSAALGKYDVKIKRRVMPKSIDEGDDFSEQIELIRHELSRKNLAEEEE-KGDEESILSQK 285

Query: 335 RFDECNVSQLTIK 373
           RFDEC VS LT+K
Sbjct: 286 RFDECGVSPLTVK 298


>ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 771

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/73 (43%), Positives = 46/73 (63%)
 Frame = +2

Query: 155 SRAALGKYDIKKTKRIPLKLVELENDLSLHVQAIRNEFNKRKMAEKDTIADDDDSILSPK 334
           SRAALGKYD+K +KR+PLK +E E D       + N+    +   + +  D+ +SIL  +
Sbjct: 243 SRAALGKYDVKISKRVPLKELEEETDFEFIRYELENKMKLDRNDREKSEIDEQESILGQR 302

Query: 335 RFDECNVSQLTIK 373
           RFDEC +S LT+K
Sbjct: 303 RFDECGISPLTVK 315


>ref|XP_004143987.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like
           [Cucumis sativus] gi|449495891|ref|XP_004159976.1|
           PREDICTED: putative DEAD-box ATP-dependent RNA helicase
           33-like [Cucumis sativus]
          Length = 813

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 31/75 (41%), Positives = 49/75 (65%)
 Frame = +2

Query: 149 TRSRAALGKYDIKKTKRIPLKLVELENDLSLHVQAIRNEFNKRKMAEKDTIADDDDSILS 328
           T S A+LGK D++  KR+PLK  + E+D +  V+ +R E +K+  AE++     ++ I +
Sbjct: 284 TGSSASLGKCDVRMKKRVPLKPFDEESDFAEQVELLRYELSKKSAAEEEG-EKREEIIFT 342

Query: 329 PKRFDECNVSQLTIK 373
            KRFDEC +S LT+K
Sbjct: 343 EKRFDECGISPLTVK 357


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