BLASTX nr result

ID: Atractylodes22_contig00051506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051506
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25399.3| unnamed protein product [Vitis vinifera]               78   9e-13
ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containi...    78   9e-13
ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containi...    72   4e-11
emb|CBI15852.3| unnamed protein product [Vitis vinifera]               61   8e-08

>emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = -3

Query: 179 YQQIHAQKLVDFLHECSRARSLKEAKAVHGYVLKSNYPDENLLVLLNHVAHAYSKCS 9
           YQQ   Q L+D L +C+   S++EAKAVHG VLKSN+ D++L+VL NH AH YSKCS
Sbjct: 59  YQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCS 115


>ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 34/57 (59%), Positives = 43/57 (75%)
 Frame = -3

Query: 179 YQQIHAQKLVDFLHECSRARSLKEAKAVHGYVLKSNYPDENLLVLLNHVAHAYSKCS 9
           YQQ   Q L+D L +C+   S++EAKAVHG VLKSN+ D++L+VL NH AH YSKCS
Sbjct: 113 YQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCS 169


>ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = -3

Query: 170 IHAQKLVDFLHECSRARSLKEAKAVHGYVLKSNYPDENLLVLLNHVAHAYSKCSNL 3
           +  Q LVD L +C  AR LK+AK VHG++LKS + + + LVLLNHVAHAYSKCS++
Sbjct: 66  LQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDI 121


>ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 33/56 (58%), Positives = 43/56 (76%)
 Frame = -3

Query: 170 IHAQKLVDFLHECSRARSLKEAKAVHGYVLKSNYPDENLLVLLNHVAHAYSKCSNL 3
           +  Q LVD L +C  AR LK+AK VHG++LKS + + + LVLLNHVAHAYSKCS++
Sbjct: 66  LQIQPLVDLLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDI 121


>emb|CBI15852.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
 Frame = -3

Query: 278 SHNKAKSSTSFCSLPTCRTRAVQSNIADINPSY------YQQIH-AQKLVDFLHECSRAR 120
           S+NKAK S +  S    +           +PSY      Y + H AQ+LVD L + +   
Sbjct: 30  SNNKAKVSNATLSCSRVQKFKGVGRGKVCDPSYTAKTDRYHESHEAQELVDLLRDSAAKG 89

Query: 119 SLKEAKAVHGYVLKSNYPDENLLVLLNHVAHAYSKCS 9
           S++E K+VHG +LKS++ DE  + L NHVA+ Y++CS
Sbjct: 90  SIREGKSVHGLLLKSSFGDEESIRLFNHVAYMYAECS 126


Top