BLASTX nr result

ID: Atractylodes22_contig00051448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051448
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...   113   1e-23
ref|NP_671862.1| pentatricopeptide repeat-containing protein [Ar...   113   2e-23
gb|AAO72718.1| pentatricopeptide repeat-containing protein [Arab...   113   2e-23
ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arab...   109   2e-22
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21

>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score =  113 bits (283), Expect = 1e-23
 Identities = 55/78 (70%), Positives = 64/78 (82%)
 Frame = +2

Query: 2   NIVQALVMLEKCFDLGFVPDVITTTKVMEILCSKDRAMEAVELLERVEKKGGKIDVVAYN 181
           N+VQALV+LEK F LGFVPDV+T TKV+EILC+  R  EAVE+LERVE KGG +DVVAYN
Sbjct: 259 NLVQALVLLEKSFSLGFVPDVVTMTKVVEILCNAGRVTEAVEMLERVEYKGGLVDVVAYN 318

Query: 182 TLVKGFCNLKKAKAARRF 235
           TL++GFC L K K A RF
Sbjct: 319 TLLRGFCRLGKIKVAHRF 336


>ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17525, mitochondrial; Flags: Precursor
           gi|330251547|gb|AEC06641.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 626

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/77 (66%), Positives = 66/77 (85%)
 Frame = +2

Query: 5   IVQALVMLEKCFDLGFVPDVITTTKVMEILCSKDRAMEAVELLERVEKKGGKIDVVAYNT 184
           ++Q++V+LEKCF LGFVPDV+T TKVME+LC++ R  EA+E+LERVE KGGK+DVVA NT
Sbjct: 264 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 323

Query: 185 LVKGFCNLKKAKAARRF 235
           LVKG+C L K + A+RF
Sbjct: 324 LVKGYCALGKMRVAQRF 340


>gb|AAO72718.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 532

 Score =  113 bits (282), Expect = 2e-23
 Identities = 51/77 (66%), Positives = 66/77 (85%)
 Frame = +2

Query: 5   IVQALVMLEKCFDLGFVPDVITTTKVMEILCSKDRAMEAVELLERVEKKGGKIDVVAYNT 184
           ++Q++V+LEKCF LGFVPDV+T TKVME+LC++ R  EA+E+LERVE KGGK+DVVA NT
Sbjct: 163 LIQSMVLLEKCFSLGFVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 222

Query: 185 LVKGFCNLKKAKAARRF 235
           LVKG+C L K + A+RF
Sbjct: 223 LVKGYCALGKMRVAQRF 239


>ref|XP_002884065.1| hypothetical protein ARALYDRAFT_343373 [Arabidopsis lyrata subsp.
           lyrata] gi|297329905|gb|EFH60324.1| hypothetical protein
           ARALYDRAFT_343373 [Arabidopsis lyrata subsp. lyrata]
          Length = 1056

 Score =  109 bits (273), Expect = 2e-22
 Identities = 49/77 (63%), Positives = 65/77 (84%)
 Frame = +2

Query: 5   IVQALVMLEKCFDLGFVPDVITTTKVMEILCSKDRAMEAVELLERVEKKGGKIDVVAYNT 184
           ++Q++V+LEKCF LG VPDV+T TKVME+LC++ R  EA+E+LERVE KGGK+DVVA NT
Sbjct: 252 LIQSMVLLEKCFSLGLVPDVVTVTKVMEVLCNEGRVSEALEVLERVESKGGKVDVVACNT 311

Query: 185 LVKGFCNLKKAKAARRF 235
           LVKG+C + K + A+RF
Sbjct: 312 LVKGYCAVGKMRVAQRF 328


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/73 (69%), Positives = 59/73 (80%)
 Frame = +2

Query: 2   NIVQALVMLEKCFDLGFVPDVITTTKVMEILCSKDRAMEAVELLERVEKKGGKIDVVAYN 181
           N VQALV+LEK F LGFVPDV+T TKV+EILC+  R  EAVE+LERVE KGG +DVVA+N
Sbjct: 235 NFVQALVLLEKSFSLGFVPDVVTVTKVVEILCNVGRVTEAVEILERVESKGGVVDVVAHN 294

Query: 182 TLVKGFCNLKKAK 220
           TL+KGFC   K K
Sbjct: 295 TLIKGFCKFGKVK 307


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