BLASTX nr result

ID: Atractylodes22_contig00051354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051354
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN80085.1| hypothetical protein VITISV_011295 [Vitis vinifera]    62   4e-08
ref|XP_002514941.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_002311719.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>emb|CAN80085.1| hypothetical protein VITISV_011295 [Vitis vinifera]
          Length = 112

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/88 (38%), Positives = 44/88 (50%), Gaps = 8/88 (9%)
 Frame = +2

Query: 68  DHGLRTRSFRDEDYNTRRVFLTSYPLHFDHDHE--------DHQQTQTPATGDDXXXXXX 223
           D+G+R RSFR+EDYN RRVFL SYPL +  + E        D +      T         
Sbjct: 3   DNGMRARSFRNEDYNNRRVFLRSYPLDWGENDEENKDKGKKDEENKDKGKTERVTKECDA 62

Query: 224 XXXXXXXXXXXXEWGGGRWVVLRRFKHK 307
                       +WGGG+ ++LRRFKHK
Sbjct: 63  KKPVRKKILAVLQWGGGKILILRRFKHK 90


>ref|XP_002514941.1| conserved hypothetical protein [Ricinus communis]
           gi|223545992|gb|EEF47495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 156

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 31/79 (39%), Positives = 43/79 (54%)
 Frame = +2

Query: 71  HGLRTRSFRDEDYNTRRVFLTSYPLHFDHDHEDHQQTQTPATGDDXXXXXXXXXXXXXXX 250
           +G+RTRSFR EDYN RRVFL SYPL ++ + +   +     T ++               
Sbjct: 4   NGMRTRSFRYEDYNNRRVFLRSYPLQWEGEDQKANEEMGKVTKEN----SGKKPIKKIIL 59

Query: 251 XXXEWGGGRWVVLRRFKHK 307
               WG G+ VVL+RF+HK
Sbjct: 60  SIIHWGEGKIVVLKRFQHK 78


>ref|XP_002311719.1| predicted protein [Populus trichocarpa]
           gi|224159625|ref|XP_002338101.1| predicted protein
           [Populus trichocarpa] gi|222851539|gb|EEE89086.1|
           predicted protein [Populus trichocarpa]
           gi|222870908|gb|EEF08039.1| predicted protein [Populus
           trichocarpa]
          Length = 145

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/80 (37%), Positives = 41/80 (51%)
 Frame = +2

Query: 68  DHGLRTRSFRDEDYNTRRVFLTSYPLHFDHDHEDHQQTQTPATGDDXXXXXXXXXXXXXX 247
           ++G +TRS R +DY  RRVFL SYPLHF  + E   + +  AT  D              
Sbjct: 8   ENGTKTRSLRFQDYYNRRVFLRSYPLHFGAEDEKTNEEKVSATNKD----TEKKPIRRMF 63

Query: 248 XXXXEWGGGRWVVLRRFKHK 307
                WG G+ ++LR+FK K
Sbjct: 64  SAVIHWGEGKVLILRKFKDK 83


Top