BLASTX nr result

ID: Atractylodes22_contig00051352 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051352
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vu...   142   3e-32
emb|CBJ20670.1| hypothetical protein [Beta vulgaris subsp. marit...   142   3e-32
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]   126   2e-27
ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [S...   125   3e-27
gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subc...   125   5e-27

>emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
           gi|54606703|dbj|BAD66726.1| orf167b [Beta vulgaris
           subsp. vulgaris] gi|54606747|dbj|BAD66770.1| orf167b
           [Beta vulgaris subsp. vulgaris]
          Length = 167

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = +2

Query: 137 LSIALFNRWEINQLDVKNAFLHGYLSETVYIHQPLGFRDPRFPHHVCRLKKSLYGLKQAP 316
           LS+AL   W I+QLDVKNAFLHG L ETVY+HQPLGF+DP  P+HVC L+KSLYGLKQAP
Sbjct: 51  LSLALSKSWPIHQLDVKNAFLHGELKETVYMHQPLGFKDPDRPNHVCLLRKSLYGLKQAP 110

Query: 317 RAWYQRFTDYVTTLGFHHSSCDHSLFIYRNG 409
           RAWY+RF  YV+++GF  S  D+SLFIYRNG
Sbjct: 111 RAWYKRFAGYVSSIGFSQSQSDNSLFIYRNG 141


>emb|CBJ20670.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 167

 Score =  142 bits (358), Expect = 3e-32
 Identities = 65/91 (71%), Positives = 76/91 (83%)
 Frame = +2

Query: 137 LSIALFNRWEINQLDVKNAFLHGYLSETVYIHQPLGFRDPRFPHHVCRLKKSLYGLKQAP 316
           LS+AL   W I+QLDVKNAFLHG L ETVY+HQPLGF+DP  P+HVC L+KSLYGLKQAP
Sbjct: 51  LSLALSKSWPIHQLDVKNAFLHGELKETVYMHQPLGFKDPDRPNHVCLLRKSLYGLKQAP 110

Query: 317 RAWYQRFTDYVTTLGFHHSSCDHSLFIYRNG 409
           RAWY+RF  YV+++GF  S  D+SLFIYRNG
Sbjct: 111 RAWYKRFAGYVSSIGFSQSQSDNSLFIYRNG 141


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score =  126 bits (316), Expect = 2e-27
 Identities = 54/90 (60%), Positives = 71/90 (78%)
 Frame = +2

Query: 137  LSIALFNRWEINQLDVKNAFLHGYLSETVYIHQPLGFRDPRFPHHVCRLKKSLYGLKQAP 316
            LS+A+ + W ++QLDVKNAFLHG+L+E VY+ QP G+ DP+FP HVCRLK++LYGLKQAP
Sbjct: 934  LSLAVTSGWRLHQLDVKNAFLHGFLNEEVYMEQPPGYTDPQFPQHVCRLKRALYGLKQAP 993

Query: 317  RAWYQRFTDYVTTLGFHHSSCDHSLFIYRN 406
            RAW+ RF+ ++   GFH S  D SLF Y +
Sbjct: 994  RAWFHRFSSFLLKHGFHSSQADSSLFFYHS 1023


>ref|XP_002446435.1| hypothetical protein SORBIDRAFT_06g016046 [Sorghum bicolor]
           gi|241937618|gb|EES10763.1| hypothetical protein
           SORBIDRAFT_06g016046 [Sorghum bicolor]
          Length = 856

 Score =  125 bits (315), Expect = 3e-27
 Identities = 60/93 (64%), Positives = 68/93 (73%)
 Frame = +2

Query: 137 LSIALFNRWEINQLDVKNAFLHGYLSETVYIHQPLGFRDPRFPHHVCRLKKSLYGLKQAP 316
           L++A    W I+QLDVKNAFLHG LSETVY  QP GF DP  P HVC+L KSLYGLKQAP
Sbjct: 450 LTLAHSLDWPIHQLDVKNAFLHGTLSETVYCCQPTGFADPALPGHVCKLNKSLYGLKQAP 509

Query: 317 RAWYQRFTDYVTTLGFHHSSCDHSLFIYRNGQE 415
           RAWY RF  ++ +LGF  +  D SLFIYR G E
Sbjct: 510 RAWYSRFASFLLSLGFSEAKSDTSLFIYRRGTE 542


>gb|ABA91195.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 978

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/91 (65%), Positives = 68/91 (74%)
 Frame = +2

Query: 137 LSIALFNRWEINQLDVKNAFLHGYLSETVYIHQPLGFRDPRFPHHVCRLKKSLYGLKQAP 316
           LSIA    W I+QLDVKNAFLHG L ETVY  QP GF DP  P+ VC L+KSLYGLKQAP
Sbjct: 604 LSIAASRSWPIHQLDVKNAFLHGNLEETVYCQQPSGFVDPSAPNAVCLLQKSLYGLKQAP 663

Query: 317 RAWYQRFTDYVTTLGFHHSSCDHSLFIYRNG 409
           RAWYQRF  Y+  LGF  S+ D SLF+Y++G
Sbjct: 664 RAWYQRFATYIRQLGFTSSASDTSLFVYKDG 694


Top