BLASTX nr result

ID: Atractylodes22_contig00051266 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051266
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27790.3| unnamed protein product [Vitis vinifera]              109   3e-22
ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like...   109   3e-22
ref|XP_002869063.1| hypothetical protein ARALYDRAFT_491073 [Arab...   104   9e-21
ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsi...   104   9e-21
ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18

>emb|CBI27790.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -1

Query: 188 MKKGLLPVKNICGKEKKFSGKEALVKLLRWHFGHSEYRGKQLEAIEAVLSGRDCFCLMPT 9
           MKK  LPV+++ G EKK  GKEALVKLLRWHFGH+E+RG+QLEAIEA+LSGRDCFCLMPT
Sbjct: 1   MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPT 60

Query: 8   GG 3
           GG
Sbjct: 61  GG 62


>ref|XP_002277754.1| PREDICTED: ATP-dependent DNA helicase Q-like 3-like [Vitis
           vinifera]
          Length = 730

 Score =  109 bits (272), Expect = 3e-22
 Identities = 49/62 (79%), Positives = 56/62 (90%)
 Frame = -1

Query: 188 MKKGLLPVKNICGKEKKFSGKEALVKLLRWHFGHSEYRGKQLEAIEAVLSGRDCFCLMPT 9
           MKK  LPV+++ G EKK  GKEALVKLLRWHFGH+E+RG+QLEAIEA+LSGRDCFCLMPT
Sbjct: 1   MKKSPLPVQSVSGTEKKVCGKEALVKLLRWHFGHAEFRGRQLEAIEAILSGRDCFCLMPT 60

Query: 8   GG 3
           GG
Sbjct: 61  GG 62


>ref|XP_002869063.1| hypothetical protein ARALYDRAFT_491073 [Arabidopsis lyrata subsp.
           lyrata] gi|297314899|gb|EFH45322.1| hypothetical protein
           ARALYDRAFT_491073 [Arabidopsis lyrata subsp. lyrata]
          Length = 744

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/62 (74%), Positives = 55/62 (88%)
 Frame = -1

Query: 188 MKKGLLPVKNICGKEKKFSGKEALVKLLRWHFGHSEYRGKQLEAIEAVLSGRDCFCLMPT 9
           M K  LPV+N+   +KK +GKEALVKLLRWHFGH+++RGKQLEAI+AV+SGRDCFCLMPT
Sbjct: 1   MNKSPLPVQNVHSSDKKVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT 60

Query: 8   GG 3
           GG
Sbjct: 61  GG 62


>ref|NP_195299.2| ATP-dependent DNA helicase Q-like 3 [Arabidopsis thaliana]
           gi|75334307|sp|Q9FT72.1|RQL3_ARATH RecName:
           Full=ATP-dependent DNA helicase Q-like 3; AltName:
           Full=RecQ-like protein 3; Short=AtRecQ3; Short=AtRecQl3
           gi|11121447|emb|CAC14867.1| DNA Helicase [Arabidopsis
           thaliana] gi|332661156|gb|AEE86556.1| ATP-dependent DNA
           helicase Q-like 3 [Arabidopsis thaliana]
          Length = 713

 Score =  104 bits (259), Expect = 9e-21
 Identities = 46/62 (74%), Positives = 55/62 (88%)
 Frame = -1

Query: 188 MKKGLLPVKNICGKEKKFSGKEALVKLLRWHFGHSEYRGKQLEAIEAVLSGRDCFCLMPT 9
           MKK  LPV+N+   +K  +GKEALVKLLRWHFGH+++RGKQLEAI+AV+SGRDCFCLMPT
Sbjct: 1   MKKSPLPVQNVQSSDKNVAGKEALVKLLRWHFGHADFRGKQLEAIQAVVSGRDCFCLMPT 60

Query: 8   GG 3
           GG
Sbjct: 61  GG 62


>ref|XP_002327725.1| predicted protein [Populus trichocarpa] gi|222836810|gb|EEE75203.1|
           predicted protein [Populus trichocarpa]
          Length = 326

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/63 (73%), Positives = 53/63 (84%), Gaps = 1/63 (1%)
 Frame = -1

Query: 188 MKKGLLP-VKNICGKEKKFSGKEALVKLLRWHFGHSEYRGKQLEAIEAVLSGRDCFCLMP 12
           MKK  LP V+N   K++K + KE LVKLLRWHFG+ ++RGKQLEAIEAVLSGRDCFCLMP
Sbjct: 1   MKKSPLPMVQNTSSKDEKRTRKETLVKLLRWHFGYQDFRGKQLEAIEAVLSGRDCFCLMP 60

Query: 11  TGG 3
           TGG
Sbjct: 61  TGG 63


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