BLASTX nr result

ID: Atractylodes22_contig00051264 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051264
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004465247.1| hypothetical chloroplast RF19 [Jacobaea vulg...   129   3e-28
ref|YP_004465235.1| hypothetical chloroplast RF19 [Jacobaea vulg...   129   3e-28
sp|Q1KXH4.1|YCF1_LACSA RecName: Full=Putative membrane protein y...   128   4e-28
ref|YP_001837407.1| hypothetical chloroplast RF19 [Guizotia abys...   127   1e-27
ref|YP_588165.1| hypothetical chloroplast RF1 [Helianthus annuus...   127   1e-27

>ref|YP_004465247.1| hypothetical chloroplast RF19 [Jacobaea vulgaris]
           gi|308156143|gb|ADO15471.1| hypothetical chloroplast
           RF19 [Jacobaea vulgaris]
          Length = 191

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/65 (98%), Positives = 64/65 (98%)
 Frame = -1

Query: 195 GPSYLFLLRAHVME*GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 16
           GPSYLFLLRAHVME GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA
Sbjct: 38  GPSYLFLLRAHVMEEGEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 97

Query: 15  LPYLL 1
           LPYLL
Sbjct: 98  LPYLL 102


>ref|YP_004465235.1| hypothetical chloroplast RF19 [Jacobaea vulgaris]
           gi|308156131|gb|ADO15459.1| hypothetical chloroplast
           RF19 [Jacobaea vulgaris]
          Length = 1691

 Score =  129 bits (323), Expect = 3e-28
 Identities = 64/65 (98%), Positives = 64/65 (98%)
 Frame = -1

Query: 195 GPSYLFLLRAHVME*GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 16
           GPSYLFLLRAHVME GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA
Sbjct: 38  GPSYLFLLRAHVMEEGEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 97

Query: 15  LPYLL 1
           LPYLL
Sbjct: 98  LPYLL 102


>sp|Q1KXH4.1|YCF1_LACSA RecName: Full=Putative membrane protein ycf1; Short=RF1
           gi|88657030|gb|ABD47280.1| hypothetical chloroplast RF1
           [Lactuca sativa]
          Length = 1673

 Score =  128 bits (322), Expect = 4e-28
 Identities = 63/65 (96%), Positives = 64/65 (98%)
 Frame = -1

Query: 195 GPSYLFLLRAHVME*GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 16
           GPSYLFLLRAH+ME GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA
Sbjct: 38  GPSYLFLLRAHIMEEGEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 97

Query: 15  LPYLL 1
           LPYLL
Sbjct: 98  LPYLL 102


>ref|YP_001837407.1| hypothetical chloroplast RF19 [Guizotia abyssinica]
           gi|179366302|gb|ACB86573.1| hypothetical chloroplast
           RF19 [Guizotia abyssinica]
          Length = 1679

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -1

Query: 195 GPSYLFLLRAHVME*GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 16
           GPSYLFLLRAHVME GEEG EKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA
Sbjct: 38  GPSYLFLLRAHVMEEGEEGAEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 97

Query: 15  LPYLL 1
           LPYLL
Sbjct: 98  LPYLL 102


>ref|YP_588165.1| hypothetical chloroplast RF1 [Helianthus annuus]
           gi|118574751|sp|Q1KXR1.1|YCF1_HELAN RecName:
           Full=Putative membrane protein ycf1; Short=RF1
           gi|88656942|gb|ABD47193.1| hypothetical chloroplast RF1
           [Helianthus annuus]
          Length = 1705

 Score =  127 bits (318), Expect = 1e-27
 Identities = 63/65 (96%), Positives = 63/65 (96%)
 Frame = -1

Query: 195 GPSYLFLLRAHVME*GEEGTEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 16
           GPSYLFLLRAHVME GEEG EKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA
Sbjct: 38  GPSYLFLLRAHVMEEGEEGAEKKVSATTGFITGQLIMFISIYYAPLHLALGRPHTITVLA 97

Query: 15  LPYLL 1
           LPYLL
Sbjct: 98  LPYLL 102


Top