BLASTX nr result

ID: Atractylodes22_contig00051250 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051250
         (247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    63   3e-08
ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Gl...    60   2e-07

>ref|XP_002302447.1| predicted protein [Populus trichocarpa] gi|222844173|gb|EEE81720.1|
           predicted protein [Populus trichocarpa]
          Length = 502

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/81 (40%), Positives = 48/81 (59%)
 Frame = -2

Query: 246 NNESFSCRNIFNHFQSAGRKRFTIHIYCYLRDAKSRNHILCPSMDREENFKELESGRFHL 67
           NNES SC +IF++   A      I+ Y +L  A  +N    PS+   E+ +EL+SGRFHL
Sbjct: 15  NNESLSCSHIFHYVPRATEMNLAIYSYFHLSRATCKNLCFYPSVPFNEDLQELQSGRFHL 74

Query: 66  LWLVHKFPVQQKVLDWMSGDP 4
           +W+ HK+P    +L  + GDP
Sbjct: 75  IWISHKYP----LLHQLQGDP 91


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/70 (41%), Positives = 43/70 (61%)
 Frame = -2

Query: 240 ESFSCRNIFNHFQSAGRKRFTIHIYCYLRDAKSRNHILCPSMDREENFKELESGRFHLLW 61
           E FSCR+IF           T+++Y +LR +  +  ++ P M+ ++N KE E GRFH+L 
Sbjct: 732 EPFSCRSIFESSPLVREISLTMYVYFHLRKSSLQKFLVHPHMNLKDNLKEPEDGRFHMLH 791

Query: 60  LVHKFPVQQK 31
           + HKFPV QK
Sbjct: 792 VTHKFPVLQK 801


>ref|XP_003530402.1| PREDICTED: CST complex subunit CTC1-like [Glycine max]
          Length = 706

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 28/71 (39%), Positives = 45/71 (63%)
 Frame = -2

Query: 243 NESFSCRNIFNHFQSAGRKRFTIHIYCYLRDAKSRNHILCPSMDREENFKELESGRFHLL 64
           +ES SCR IFN  ++ G    +I +YC+ ++AK +N  L   ++ +   + LE G +HLL
Sbjct: 222 SESLSCRTIFNCTKAEGELSTSIFVYCHWKNAKCKNIPLYSCINSKNETETLEPGSYHLL 281

Query: 63  WLVHKFPVQQK 31
            + HKFP+Q+K
Sbjct: 282 RVSHKFPLQEK 292


Top