BLASTX nr result

ID: Atractylodes22_contig00051208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051208
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610309.1| Signal recognition particle receptor subunit...   108   3e-22
ref|XP_002867337.1| signal recognition particle receptor alpha s...   107   8e-22
ref|NP_194789.1| signal recognition particle receptor subunit al...   107   8e-22
ref|XP_002278056.1| PREDICTED: signal recognition particle recep...   106   2e-21
emb|CAN66971.1| hypothetical protein VITISV_013670 [Vitis vinife...   106   2e-21

>ref|XP_003610309.1| Signal recognition particle receptor subunit alpha [Medicago
           truncatula] gi|355511364|gb|AES92506.1| Signal
           recognition particle receptor subunit alpha [Medicago
           truncatula]
          Length = 631

 Score =  108 bits (271), Expect = 3e-22
 Identities = 56/76 (73%), Positives = 61/76 (80%), Gaps = 6/76 (7%)
 Frame = -2

Query: 252 VAYWLQHHDINVMRAACDTFCSGVVEQLRTHARRLQ------SCEKDPAIPAKEVIQEAT 91
           VAYWLQ H++NVM AACDTF SG VEQLRTHARRLQ        EKDPA+ AKE IQEA+
Sbjct: 445 VAYWLQQHNVNVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAS 504

Query: 90  RNGSDGVLVDTAGQMQ 43
           RNGSD VLVDTAG+MQ
Sbjct: 505 RNGSDVVLVDTAGRMQ 520


>ref|XP_002867337.1| signal recognition particle receptor alpha subunit family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297313173|gb|EFH43596.1| signal recognition particle
           receptor alpha subunit family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 633

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/76 (73%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
 Frame = -2

Query: 252 VAYWLQHHDINVMRAACDTFCSGVVEQLRTHARRLQ------SCEKDPAIPAKEVIQEAT 91
           VAYWLQ H ++VM AACDTF SG VEQLRTHARRLQ        EKDPA+ AKE IQEAT
Sbjct: 447 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 506

Query: 90  RNGSDGVLVDTAGQMQ 43
           RNGSD VLVDTAG+MQ
Sbjct: 507 RNGSDVVLVDTAGRMQ 522


>ref|NP_194789.1| signal recognition particle receptor subunit alpha [Arabidopsis
           thaliana] gi|7269961|emb|CAB79778.1| signal recognition
           particle receptor-like protein [Arabidopsis thaliana]
           gi|18086492|gb|AAL57699.1| AT4g30600/F17I23_60
           [Arabidopsis thaliana] gi|22137194|gb|AAM91442.1|
           AT4g30600/F17I23_60 [Arabidopsis thaliana]
           gi|332660385|gb|AEE85785.1| signal recognition particle
           receptor subunit alpha [Arabidopsis thaliana]
          Length = 634

 Score =  107 bits (268), Expect = 8e-22
 Identities = 56/76 (73%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
 Frame = -2

Query: 252 VAYWLQHHDINVMRAACDTFCSGVVEQLRTHARRLQ------SCEKDPAIPAKEVIQEAT 91
           VAYWLQ H ++VM AACDTF SG VEQLRTHARRLQ        EKDPA+ AKE IQEAT
Sbjct: 448 VAYWLQQHKVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAVVAKEAIQEAT 507

Query: 90  RNGSDGVLVDTAGQMQ 43
           RNGSD VLVDTAG+MQ
Sbjct: 508 RNGSDVVLVDTAGRMQ 523


>ref|XP_002278056.1| PREDICTED: signal recognition particle receptor subunit alpha
           [Vitis vinifera]
          Length = 616

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/76 (73%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
 Frame = -2

Query: 252 VAYWLQHHDINVMRAACDTFCSGVVEQLRTHARRLQ------SCEKDPAIPAKEVIQEAT 91
           VAYWL  H+++VM AACDTF SG VEQLRTHARRLQ        EKDPAI AKE IQEAT
Sbjct: 430 VAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEAT 489

Query: 90  RNGSDGVLVDTAGQMQ 43
           RNGSD VLVDTAG+MQ
Sbjct: 490 RNGSDVVLVDTAGRMQ 505


>emb|CAN66971.1| hypothetical protein VITISV_013670 [Vitis vinifera]
           gi|297743653|emb|CBI36536.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  106 bits (264), Expect = 2e-21
 Identities = 56/76 (73%), Positives = 60/76 (78%), Gaps = 6/76 (7%)
 Frame = -2

Query: 252 VAYWLQHHDINVMRAACDTFCSGVVEQLRTHARRLQ------SCEKDPAIPAKEVIQEAT 91
           VAYWL  H+++VM AACDTF SG VEQLRTHARRLQ        EKDPAI AKE IQEAT
Sbjct: 127 VAYWLLQHNVSVMMAACDTFRSGAVEQLRTHARRLQIPIFEKGYEKDPAIVAKEAIQEAT 186

Query: 90  RNGSDGVLVDTAGQMQ 43
           RNGSD VLVDTAG+MQ
Sbjct: 187 RNGSDVVLVDTAGRMQ 202


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