BLASTX nr result

ID: Atractylodes22_contig00051184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051184
         (412 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containi...   192   2e-47
emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]   192   2e-47
ref|XP_004147301.1| PREDICTED: pentatricopeptide repeat-containi...   162   2e-38
ref|XP_003597542.1| Pentatricopeptide repeat-containing protein ...   162   2e-38
emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]   149   3e-34

>ref|XP_002270478.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 602

 Score =  192 bits (489), Expect = 2e-47
 Identities = 89/135 (65%), Positives = 108/135 (80%)
 Frame = +3

Query: 3   FTVVLTACNHSGLLDKGISYFEKMRSDYNLAPEIDQYACLIDLYARKGDLKKAKKVMEEM 182
           FT VLTACNH+G LDKGI YF +MR DY L P++DQYACL+DLY R G L+KAK++ME +
Sbjct: 409 FTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAI 468

Query: 183 PFQANAVMWSSFLSSCKEYGNAELGREAAYKLFELEPHSPVPYLILEDIYAGAGLWNEVV 362
           P + N+VMW SFLSSCK YG AELGREAA KLF++EP S  PY+ +  IYA AGLW+EVV
Sbjct: 469 PCEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVV 528

Query: 363 HLRKLMNENGVRKSA 407
            +RKLM + G+RKSA
Sbjct: 529 EIRKLMKQKGLRKSA 543


>emb|CAN67116.1| hypothetical protein VITISV_026465 [Vitis vinifera]
          Length = 1817

 Score =  192 bits (488), Expect = 2e-47
 Identities = 89/135 (65%), Positives = 107/135 (79%)
 Frame = +3

Query: 3    FTVVLTACNHSGLLDKGISYFEKMRSDYNLAPEIDQYACLIDLYARKGDLKKAKKVMEEM 182
            FT VLTACNH+G LDKGI YF +MR DY L P++DQYACL+DLY R G L+KAK++ME  
Sbjct: 1624 FTAVLTACNHAGFLDKGIDYFNQMRRDYGLVPDLDQYACLVDLYVRNGHLRKAKELMEAX 1683

Query: 183  PFQANAVMWSSFLSSCKEYGNAELGREAAYKLFELEPHSPVPYLILEDIYAGAGLWNEVV 362
            P + N+VMW SFLSSCK YG AELGREAA KLF++EP S  PY+ +  IYA AGLW+EVV
Sbjct: 1684 PXEPNSVMWGSFLSSCKLYGEAELGREAADKLFKMEPCSTAPYVAMASIYAQAGLWSEVV 1743

Query: 363  HLRKLMNENGVRKSA 407
             +RKLM + G+RKSA
Sbjct: 1744 EIRKLMKQKGLRKSA 1758


>ref|XP_004147301.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
           gi|449501263|ref|XP_004161322.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 265

 Score =  162 bits (411), Expect = 2e-38
 Identities = 75/135 (55%), Positives = 101/135 (74%)
 Frame = +3

Query: 3   FTVVLTACNHSGLLDKGISYFEKMRSDYNLAPEIDQYACLIDLYARKGDLKKAKKVMEEM 182
           FT VLTACNH+GLLD+ + YF KMR +Y+L P+ID YACLIDLYAR G+++KAK++ME+M
Sbjct: 77  FTAVLTACNHAGLLDEAVEYFNKMRREYHLDPQIDHYACLIDLYARNGNVEKAKQMMEQM 136

Query: 183 PFQANAVMWSSFLSSCKEYGNAELGREAAYKLFELEPHSPVPYLILEDIYAGAGLWNEVV 362
           P+++N V+  S L +CK +   ELGRE A++L E++P +  PYL L  I A AGLW +V 
Sbjct: 137 PYESNYVVLCSLLGACKVHAEVELGREVAHRLIEMDPSNAAPYLTLAHISAKAGLWTQVG 196

Query: 363 HLRKLMNENGVRKSA 407
            +RK M +  VRKSA
Sbjct: 197 EIRKEMQQKRVRKSA 211


>ref|XP_003597542.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355486590|gb|AES67793.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 280

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/135 (56%), Positives = 97/135 (71%)
 Frame = +3

Query: 3   FTVVLTACNHSGLLDKGISYFEKMRSDYNLAPEIDQYACLIDLYARKGDLKKAKKVMEEM 182
           FT  LTACNH+G ++KG  YF KM + Y L+P+ID YACLIDLYAR G+L+KA  +MEEM
Sbjct: 77  FTAFLTACNHAGFINKGEEYFNKMITKYGLSPDIDIYACLIDLYARNGNLRKATDLMEEM 136

Query: 183 PFQANAVMWSSFLSSCKEYGNAELGREAAYKLFELEPHSPVPYLILEDIYAGAGLWNEVV 362
           P+  N ++WSSFLS+CK YG+ ELGREAA +L ++EP +  PYL L  IY   GLWN+  
Sbjct: 137 PYDPNCIIWSSFLSACKIYGDVELGREAANQLIKMEPCNAAPYLTLAHIYTTKGLWNKAS 196

Query: 363 HLRKLMNENGVRKSA 407
            +R LM +   RK A
Sbjct: 197 EVRSLMQQRVKRKPA 211


>emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  149 bits (375), Expect = 3e-34
 Identities = 63/133 (47%), Positives = 94/133 (70%)
 Frame = +3

Query: 3    FTVVLTACNHSGLLDKGISYFEKMRSDYNLAPEIDQYACLIDLYARKGDLKKAKKVMEEM 182
            F  VL AC H GL++KG+ YF  M S+Y L P+++ Y+C++D+  R G + KA +++E M
Sbjct: 619  FLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGM 678

Query: 183  PFQANAVMWSSFLSSCKEYGNAELGREAAYKLFELEPHSPVPYLILEDIYAGAGLWNEVV 362
            PF+A+AV+W + LS CK +GN E+  +AAY + +LEP     Y++L +IYA AG+WNEV 
Sbjct: 679  PFEADAVIWRTLLSXCKIHGNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVT 738

Query: 363  HLRKLMNENGVRK 401
             LRK+M  NG++K
Sbjct: 739  KLRKMMRFNGLKK 751


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