BLASTX nr result

ID: Atractylodes22_contig00051167 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051167
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    78   5e-19
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    74   1e-17
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    77   1e-16
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    71   1e-16
ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225...    75   8e-16

>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 77.8 bits (190), Expect(2) = 5e-19
 Identities = 36/73 (49%), Positives = 53/73 (72%)
 Frame = +3

Query: 18   LNSVIG*TNPQTMKMEGLVHGQKVVVLIGSGATDNFISKALVEKLKLPIDPTGDYSITMG 197
            LNSV+G T P TMK++G +  ++V++L+ SGAT NF+S  LV++L LP+  T  Y + MG
Sbjct: 1047 LNSVVGLTTPGTMKIKGTIGSKEVIILVDSGATHNFLSLELVQQLTLPLTTTTSYGVMMG 1106

Query: 198  SGSTVKGIGVRRG 236
            +G +VKG G+ RG
Sbjct: 1107 TGISVKGKGICRG 1119



 Score = 41.2 bits (95), Expect(2) = 5e-19
 Identities = 16/35 (45%), Positives = 29/35 (82%)
 Frame = +1

Query: 235  GLKVNIQGMDIVEEFLPIQLDNSNVILEIQWLESL 339
            G+ +++QG+ +VE+FLP++L N++VIL + WL +L
Sbjct: 1119 GVCISMQGLTVVEDFLPLELGNTDVILGMPWLGTL 1153


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 73.9 bits (180), Expect(2) = 1e-17
 Identities = 33/75 (44%), Positives = 52/75 (69%)
 Frame = +3

Query: 9   EGHLNSVIG*TNPQTMKMEGLVHGQKVVVLIGSGATDNFISKALVEKLKLPIDPTGDYSI 188
           E  LNSVIG +NP+TMK+ GL+   +VVV+I  GAT NF+S   ++KL +P+  + ++ +
Sbjct: 468 EVSLNSVIGLSNPKTMKLSGLIDNHEVVVMIDPGATHNFLSLKAIDKLGIPVTESEEFGV 527

Query: 189 TMGSGSTVKGIGVRR 233
           ++G G  V+G G+ R
Sbjct: 528 SLGDGQAVRGTGICR 542



 Score = 40.4 bits (93), Expect(2) = 1e-17
 Identities = 17/28 (60%), Positives = 24/28 (85%)
 Frame = +1

Query: 256 GMDIVEEFLPIQLDNSNVILEIQWLESL 339
           G+ +VE+FLP+ L NS+VIL +QWLE+L
Sbjct: 551 GLVVVEDFLPLGLGNSDVILGVQWLETL 578


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 77.0 bits (188), Expect(2) = 1e-16
 Identities = 36/77 (46%), Positives = 53/77 (68%)
 Frame = +3

Query: 18   LNSVIG*TNPQTMKMEGLVHGQKVVVLIGSGATDNFISKALVEKLKLPIDPTGDYSITMG 197
            +NSV+G TNP+TMK+ G +  ++V++LI  GAT NFIS  +V++L LP   T  Y + +G
Sbjct: 1318 INSVVGLTNPKTMKVRGKIKDREVIILIDCGATHNFISDKVVQELSLPTKTTSHYGVILG 1377

Query: 198  SGSTVKGIGVRRGAKGE 248
            SG+ VKG G+  G + E
Sbjct: 1378 SGAAVKGKGICEGIELE 1394



 Score = 34.3 bits (77), Expect(2) = 1e-16
 Identities = 13/35 (37%), Positives = 24/35 (68%)
 Frame = +1

Query: 235  GLKVNIQGMDIVEEFLPIQLDNSNVILEIQWLESL 339
            G+++ ++G  +   FLP++L   + +LE+QWL SL
Sbjct: 1390 GIELELEGWKVEANFLPLELGGVDGVLEMQWLYSL 1424


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 71.2 bits (173), Expect(2) = 1e-16
 Identities = 31/69 (44%), Positives = 51/69 (73%)
 Frame = +3

Query: 18  LNSVIG*TNPQTMKMEGLVHGQKVVVLIGSGATDNFISKALVEKLKLPIDPTGDYSITMG 197
           LNSV+G ++P+T+KMEG ++GQKV+V++  GAT NFIS   V +L++PI  +  + +++G
Sbjct: 408 LNSVMGISSPKTLKMEGTIYGQKVIVMVDPGATHNFISLDTVRRLQIPISSSRPFGVSLG 467

Query: 198 SGSTVKGIG 224
           +G+   G G
Sbjct: 468 TGAEAHGQG 476



 Score = 40.0 bits (92), Expect(2) = 1e-16
 Identities = 15/32 (46%), Positives = 27/32 (84%)
 Frame = +1

Query: 244 VNIQGMDIVEEFLPIQLDNSNVILEIQWLESL 339
           +++QG+ ++E++LP+ L NS++IL +QWLE L
Sbjct: 483 LHLQGVCVMEDYLPLTLGNSDLILGVQWLEKL 514


>ref|XP_004169005.1| PREDICTED: uncharacterized protein LOC101225033 [Cucumis sativus]
          Length = 307

 Score = 75.5 bits (184), Expect(2) = 8e-16
 Identities = 36/80 (45%), Positives = 57/80 (71%), Gaps = 6/80 (7%)
 Frame = +3

Query: 6   EEGH------LNSVIG*TNPQTMKMEGLVHGQKVVVLIGSGATDNFISKALVEKLKLPID 167
           EE H      +NSV+G +NP+TMK+ G + G++V++L+  GAT N IS+ LV++L+L   
Sbjct: 156 EESHAVVELSINSVVGLSNPRTMKVNGWLQGKEVIILVDRGATHNLISEKLVKELQLNTK 215

Query: 168 PTGDYSITMGSGSTVKGIGV 227
            T +Y++ +GSG+T+KG GV
Sbjct: 216 DTSNYAVILGSGTTIKGKGV 235



 Score = 32.7 bits (73), Expect(2) = 8e-16
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +1

Query: 265 IVEEFLPIQLDNSNVILEIQWLESL 339
           +++EFLP++L   +VIL +QWL SL
Sbjct: 248 VIDEFLPLELGGVDVILGMQWLYSL 272


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