BLASTX nr result

ID: Atractylodes22_contig00051084 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00051084
         (585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23583.3| unnamed protein product [Vitis vinifera]              171   6e-41
ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-a...   171   6e-41
emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]   171   6e-41
ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricin...   137   1e-30
ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-a...   131   9e-29

>emb|CBI23583.3| unnamed protein product [Vitis vinifera]
          Length = 1287

 Score =  171 bits (434), Expect = 6e-41
 Identities = 103/199 (51%), Positives = 130/199 (65%), Gaps = 9/199 (4%)
 Frame = -3

Query: 571 ISVKKEYDNTMEGFQAGVHSIEAEKPKEPKPNFIKS---EVISVKKEENPSDEAKSEKQK 401
           I +K+E D T+     G  S   E       +F++S   +VIS     N         QK
Sbjct: 223 IQIKEELDATL----LGTDSARNENSGMRGDSFVQSRNGKVISDGNGRNTQSVPYHNPQK 278

Query: 400 PKLVQPISS--MPASNFKKE---RQGVVEDRKVSLAVIENEDFEEEADWLLVGRTAITGL 236
           P  V+  ++  +P  N +K    +QG +EDR V+  ++E+ DF EE DW LVGRT I GL
Sbjct: 279 PFNVKKETAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEPDWFLVGRTPIIGL 338

Query: 235 STTKGRKLEDNEIVHFAFPSTDSRSK-SGYWVSSRAANAASGIVRFSTKRSGEIGRLPME 59
           STTKGRKL DNEIVHF+FPS D R+K +  WV+ +AA+AAS IVRFSTKRSGEIGRLPME
Sbjct: 339 STTKGRKLVDNEIVHFSFPSADLRNKCNSKWVA-KAASAASAIVRFSTKRSGEIGRLPME 397

Query: 58  WSKCLIPLVNSKKVKILGR 2
           W+KC+IPLVNS KVK+LGR
Sbjct: 398 WTKCIIPLVNSSKVKVLGR 416


>ref|XP_002280814.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Vitis vinifera]
          Length = 1224

 Score =  171 bits (434), Expect = 6e-41
 Identities = 103/199 (51%), Positives = 130/199 (65%), Gaps = 9/199 (4%)
 Frame = -3

Query: 571 ISVKKEYDNTMEGFQAGVHSIEAEKPKEPKPNFIKS---EVISVKKEENPSDEAKSEKQK 401
           I +K+E D T+     G  S   E       +F++S   +VIS     N         QK
Sbjct: 223 IQIKEELDATL----LGTDSARNENSGMRGDSFVQSRNGKVISDGNGRNTQSVPYHNPQK 278

Query: 400 PKLVQPISS--MPASNFKKE---RQGVVEDRKVSLAVIENEDFEEEADWLLVGRTAITGL 236
           P  V+  ++  +P  N +K    +QG +EDR V+  ++E+ DF EE DW LVGRT I GL
Sbjct: 279 PFNVKKETAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEPDWFLVGRTPIIGL 338

Query: 235 STTKGRKLEDNEIVHFAFPSTDSRSK-SGYWVSSRAANAASGIVRFSTKRSGEIGRLPME 59
           STTKGRKL DNEIVHF+FPS D R+K +  WV+ +AA+AAS IVRFSTKRSGEIGRLPME
Sbjct: 339 STTKGRKLVDNEIVHFSFPSADLRNKCNSKWVA-KAASAASAIVRFSTKRSGEIGRLPME 397

Query: 58  WSKCLIPLVNSKKVKILGR 2
           W+KC+IPLVNS KVK+LGR
Sbjct: 398 WTKCIIPLVNSSKVKVLGR 416


>emb|CAN71217.1| hypothetical protein VITISV_033485 [Vitis vinifera]
          Length = 1249

 Score =  171 bits (434), Expect = 6e-41
 Identities = 103/199 (51%), Positives = 130/199 (65%), Gaps = 9/199 (4%)
 Frame = -3

Query: 571 ISVKKEYDNTMEGFQAGVHSIEAEKPKEPKPNFIKS---EVISVKKEENPSDEAKSEKQK 401
           I +K+E D T+     G  S   E       +F++S   +VIS     N         QK
Sbjct: 223 IQIKEELDATL----LGTDSARNENSGMRGDSFVQSRNGKVISDGNGRNTQSVPYHNPQK 278

Query: 400 PKLVQPISS--MPASNFKKE---RQGVVEDRKVSLAVIENEDFEEEADWLLVGRTAITGL 236
           P  V+  ++  +P  N +K    +QG +EDR V+  ++E+ DF EE DW LVGRT I GL
Sbjct: 279 PFNVKKETAQFLPYGNPQKNFNVKQGKIEDRPVTSVLVEDGDFPEEPDWFLVGRTPIIGL 338

Query: 235 STTKGRKLEDNEIVHFAFPSTDSRSK-SGYWVSSRAANAASGIVRFSTKRSGEIGRLPME 59
           STTKGRKL DNEIVHF+FPS D R+K +  WV+ +AA+AAS IVRFSTKRSGEIGRLPME
Sbjct: 339 STTKGRKLVDNEIVHFSFPSADLRNKCNSKWVA-KAASAASAIVRFSTKRSGEIGRLPME 397

Query: 58  WSKCLIPLVNSKKVKILGR 2
           W+KC+IPLVNS KVK+LGR
Sbjct: 398 WTKCIIPLVNSSKVKVLGR 416


>ref|XP_002529311.1| DNA repair helicase rad5,16, putative [Ricinus communis]
           gi|223531235|gb|EEF33080.1| DNA repair helicase rad5,16,
           putative [Ricinus communis]
          Length = 1051

 Score =  137 bits (345), Expect = 1e-30
 Identities = 87/200 (43%), Positives = 113/200 (56%), Gaps = 6/200 (3%)
 Frame = -3

Query: 583 KVKPISVKKEYDNTMEGFQAGVHSIEAEKPKEPKPNFIKSEVISVKKEENPSDEAKSEKQ 404
           +V PI   KE    +E F+      E ++ KE    F +   +SV    N +DE K ++ 
Sbjct: 82  RVTPIEECKEKPQELEIFKV---KQEPKEVKEDVDTFKQVLGVSVTNSGN-TDECKVKEV 137

Query: 403 KPKLVQPISSMPASN------FKKERQGVVEDRKVSLAVIENEDFEEEADWLLVGRTAIT 242
           K +  +   +  +         KKE   V + R ++   +E+ DF +E DW LVG T +T
Sbjct: 138 KEEATELEETNISKREKDPKYVKKEVVAVEDTRTINGVKVEDGDFPQEKDWYLVGSTMLT 197

Query: 241 GLSTTKGRKLEDNEIVHFAFPSTDSRSKSGYWVSSRAANAASGIVRFSTKRSGEIGRLPM 62
            LSTTKGRKL DNEIVHF FP+T+ R  S +            IVRFSTKRSGEIGRLPM
Sbjct: 198 ALSTTKGRKLVDNEIVHFVFPNTNFRFNSQW------------IVRFSTKRSGEIGRLPM 245

Query: 61  EWSKCLIPLVNSKKVKILGR 2
           EW KC++PLVNS KVK LGR
Sbjct: 246 EWGKCVVPLVNSNKVKFLGR 265


>ref|XP_004134418.1| PREDICTED: putative SWI/SNF-related matrix-associated
           actin-dependent regulator of chromatin subfamily A
           member 3-like 3-like [Cucumis sativus]
           gi|449523563|ref|XP_004168793.1| PREDICTED: putative
           SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin subfamily A member 3-like 3-like
           [Cucumis sativus]
          Length = 1113

 Score =  131 bits (329), Expect = 9e-29
 Identities = 81/191 (42%), Positives = 108/191 (56%), Gaps = 5/191 (2%)
 Frame = -3

Query: 559 KEYDNTMEGFQAGVHSIEAEKPKEPKPNFIKSEV-ISVKKEENPSDEAKS----EKQKPK 395
           +EY   ++   A   S +    +EP     +S    + + +E P  E K+    +K + +
Sbjct: 136 EEYSKILKEMAAAKPSAKNNVKEEPVEAMAQSGAGTNARVKEEPDLEVKNRAFAKKARSE 195

Query: 394 LVQPISSMPASNFKKERQGVVEDRKVSLAVIENEDFEEEADWLLVGRTAITGLSTTKGRK 215
                 S+ ++    +R G   +       IE+ DF  E DW LVGRT +T +STTKG K
Sbjct: 196 TENFAMSVSSNTSGMQRNGTFSND--GRCKIEDGDFPIEPDWFLVGRTVVTAMSTTKGNK 253

Query: 214 LEDNEIVHFAFPSTDSRSKSGYWVSSRAANAASGIVRFSTKRSGEIGRLPMEWSKCLIPL 35
           L DNEIV+FAFPS+ SR              A  IVRFSTKRSGEIGRLPMEW+KC++PL
Sbjct: 254 LADNEIVNFAFPSSSSRFN------------AQWIVRFSTKRSGEIGRLPMEWAKCVVPL 301

Query: 34  VNSKKVKILGR 2
           VNS+KVKILGR
Sbjct: 302 VNSQKVKILGR 312


Top