BLASTX nr result

ID: Atractylodes22_contig00050982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050982
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523906.1| RNA-binding region-containing protein, putat...   133   2e-29
ref|XP_003528745.1| PREDICTED: heterogeneous nuclear ribonucleop...   132   2e-29
ref|NP_001242397.1| uncharacterized protein LOC100813699 [Glycin...   132   2e-29
ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265...   130   1e-28
gb|AFK34496.1| unknown [Medicago truncatula]                          128   6e-28

>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
           gi|223536836|gb|EEF38475.1| RNA-binding
           region-containing protein, putative [Ricinus communis]
          Length = 256

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/73 (83%), Positives = 68/73 (93%)
 Frame = +2

Query: 122 SNNVRPFGDTTLTKVFVGGLAWETPNDALRDHFQSYGDILEAVIISDKTTGRSKGYGFVT 301
           SN+V PFGDTTLTKVFVGGLAWETP +A+R+HF+ YG+ILEAVIISDK TGRSKGYGFVT
Sbjct: 4   SNSVGPFGDTTLTKVFVGGLAWETPKEAMREHFEKYGEILEAVIISDKLTGRSKGYGFVT 63

Query: 302 FKEPESAKNACED 340
           FKEPE+AK ACED
Sbjct: 64  FKEPEAAKKACED 76


>ref|XP_003528745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
           homolog [Glycine max]
          Length = 267

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/84 (77%), Positives = 72/84 (85%), Gaps = 3/84 (3%)
 Frame = +2

Query: 98  VTMMSSGNSNN---VRPFGDTTLTKVFVGGLAWETPNDALRDHFQSYGDILEAVIISDKT 268
           +TMMSS N+NN   V  FGDTTLTKVFVGGLAWETP DAL+DHF+ YG+ILEAVIISDK 
Sbjct: 1   MTMMSSNNNNNNNNVGEFGDTTLTKVFVGGLAWETPKDALKDHFEKYGEILEAVIISDKH 60

Query: 269 TGRSKGYGFVTFKEPESAKNACED 340
           T +SKGYGFVTFKE E+AK ACED
Sbjct: 61  TAKSKGYGFVTFKEAEAAKKACED 84


>ref|NP_001242397.1| uncharacterized protein LOC100813699 [Glycine max]
           gi|255641601|gb|ACU21073.1| unknown [Glycine max]
          Length = 269

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/81 (80%), Positives = 71/81 (87%)
 Frame = +2

Query: 98  VTMMSSGNSNNVRPFGDTTLTKVFVGGLAWETPNDALRDHFQSYGDILEAVIISDKTTGR 277
           +TMMSS N NNV  FGDTTLTKVFVGGLAWETP DAL+DHF+ YG ILEAVIISDK TG+
Sbjct: 1   MTMMSSSN-NNVGEFGDTTLTKVFVGGLAWETPKDALKDHFEKYGQILEAVIISDKHTGK 59

Query: 278 SKGYGFVTFKEPESAKNACED 340
           SKGYGFVTFKE E+AK ACE+
Sbjct: 60  SKGYGFVTFKEAEAAKKACEN 80


>ref|XP_002278641.2| PREDICTED: uncharacterized protein LOC100265113 [Vitis vinifera]
          Length = 254

 Score =  130 bits (326), Expect = 1e-28
 Identities = 60/73 (82%), Positives = 66/73 (90%)
 Frame = +2

Query: 122 SNNVRPFGDTTLTKVFVGGLAWETPNDALRDHFQSYGDILEAVIISDKTTGRSKGYGFVT 301
           SN +  FGDTTLTKVFVGGLAWETP +A+RDHF+ YG+ILEAVIISDK TGRSKGYGFVT
Sbjct: 4   SNAIGQFGDTTLTKVFVGGLAWETPKEAMRDHFEKYGEILEAVIISDKLTGRSKGYGFVT 63

Query: 302 FKEPESAKNACED 340
           FKEPE+AK ACED
Sbjct: 64  FKEPEAAKKACED 76


>gb|AFK34496.1| unknown [Medicago truncatula]
          Length = 256

 Score =  128 bits (321), Expect = 6e-28
 Identities = 59/79 (74%), Positives = 66/79 (83%)
 Frame = +2

Query: 107 MSSGNSNNVRPFGDTTLTKVFVGGLAWETPNDALRDHFQSYGDILEAVIISDKTTGRSKG 286
           M   N+ +   FGDTTLTKVFVGGLAWETP D LR+HF+ YGDILEAVIISDK TGRSKG
Sbjct: 1   MMGSNNGSPSQFGDTTLTKVFVGGLAWETPKDTLREHFEKYGDILEAVIISDKVTGRSKG 60

Query: 287 YGFVTFKEPESAKNACEDP 343
           YGFVTFK+ +SAK ACE+P
Sbjct: 61  YGFVTFKDADSAKKACEEP 79


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