BLASTX nr result

ID: Atractylodes22_contig00050935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050935
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hop...   125   5e-27
gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arab...   123   2e-26
ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211...   122   2e-26
emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]   122   2e-26
gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]               122   4e-26

>gb|AAB61111.1| Strong similarity to Zea mays retrotransposon Hopscotch polyprotein
           (gb|U12626) [Arabidopsis thaliana]
          Length = 1315

 Score =  125 bits (313), Expect = 5e-27
 Identities = 63/125 (50%), Positives = 79/125 (63%), Gaps = 6/125 (4%)
 Frame = +3

Query: 3   IPLVYWLECVLTAIFLINRTPSKVLRNLTSYEKLYKTSPDYSMFRVFGCLSFASTMLSSR 182
           IP+ YW +C+LTA++LINR P+ +L +   +E L KT P Y   +VFGCL +AST    R
Sbjct: 584 IPISYWGDCILTAVYLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDR 643

Query: 183 HKFSP*AKPCVLIGFPSHMKAYKLLDIKTRQCFYSCDVVFHENIFPF--HDASQ----VL 344
           HKFSP AK C  IG+PS  K YKLLD++T     S  VVFHE +FPF   D SQ      
Sbjct: 644 HKFSPRAKACAFIGYPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFF 703

Query: 345 HDVNP 359
            D+NP
Sbjct: 704 PDLNP 708


>gb|AAG10817.1|AC011808_5 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1413

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/107 (52%), Positives = 75/107 (70%)
 Frame = +3

Query: 3    IPLVYWLECVLTAIFLINRTPSKVLRNLTSYEKLYKTSPDYSMFRVFGCLSFASTMLSSR 182
            IPL YW +C+LTA+F+INRTPS V+ N T +E L K  PDY+  + FGCL +AST    R
Sbjct: 711  IPLSYWGDCILTAVFIINRTPSPVISNKTLFEMLTKKVPDYTHLKSFGCLCYASTSPKQR 770

Query: 183  HKFSP*AKPCVLIGFPSHMKAYKLLDIKTRQCFYSCDVVFHENIFPF 323
            HKF   A+ C  +G+PS  K YKLLD+++   F S +VVF+E++FPF
Sbjct: 771  HKFEDRARTCAFLGYPSGYKGYKLLDLESHTIFISRNVVFYEDLFPF 817


>ref|XP_004149623.1| PREDICTED: uncharacterized protein LOC101211618 [Cucumis sativus]
          Length = 2085

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/112 (49%), Positives = 77/112 (68%)
 Frame = +3

Query: 3   IPLVYWLECVLTAIFLINRTPSKVLRNLTSYEKLYKTSPDYSMFRVFGCLSFASTMLSSR 182
           +PL++W ECVL+A +LINRTP  +L N T +  L+K   DY++ + FGCL++AST   +R
Sbjct: 548 VPLIFWGECVLSAAYLINRTPMVLLSNNTPFAALFKKKADYNIIKTFGCLAYASTPSVNR 607

Query: 183 HKFSP*AKPCVLIGFPSHMKAYKLLDIKTRQCFYSCDVVFHENIFPFHDASQ 338
            KF P A+PCV +GFP  +K Y+L DI  R+ F S DV+F E +FPFH   +
Sbjct: 608 SKFDPRAQPCVFMGFPPGIKGYRLYDIAKRKFFISRDVLFFEELFPFHSIKE 659


>emb|CAN65820.1| hypothetical protein VITISV_042324 [Vitis vinifera]
          Length = 1262

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/106 (50%), Positives = 76/106 (71%)
 Frame = +3

Query: 3    IPLVYWLECVLTAIFLINRTPSKVLRNLTSYEKLYKTSPDYSMFRVFGCLSFASTMLSSR 182
            +PL YW +CVLT   LINRTPS +L N T Y+ L++  P+Y+ F+ FGCL FAST+ ++R
Sbjct: 684  LPLSYWTDCVLTXTHLINRTPSSILNNQTPYQLLFQKPPNYNYFKXFGCLCFASTITNNR 743

Query: 183  HKFSP*AKPCVLIGFPSHMKAYKLLDIKTRQCFYSCDVVFHENIFP 320
             KF P A  C+ +G+P ++K YK+LD+ T + F S +V+FHE+ FP
Sbjct: 744  GKFQPRATKCIFLGYPPNIKGYKVLDLTTXKXFVSRNVJFHESTFP 789


>gb|AAF79879.1|AC000348_32 T7N9.5 [Arabidopsis thaliana]
          Length = 1436

 Score =  122 bits (305), Expect = 4e-26
 Identities = 59/107 (55%), Positives = 72/107 (67%)
 Frame = +3

Query: 3    IPLVYWLECVLTAIFLINRTPSKVLRNLTSYEKLYKTSPDYSMFRVFGCLSFASTMLSSR 182
            IPL YW +CVLTA+FLINR  S V+ N T YE+L K  PDYS  + FGCL + ST   SR
Sbjct: 736  IPLEYWGDCVLTAVFLINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSR 795

Query: 183  HKFSP*AKPCVLIGFPSHMKAYKLLDIKTRQCFYSCDVVFHENIFPF 323
             KF P AK C+ +G+P   K YKLLDI+T     S  V+F+E+IFPF
Sbjct: 796  TKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSISRHVIFYEDIFPF 842


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