BLASTX nr result

ID: Atractylodes22_contig00050891 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050891
         (551 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511775.1| conserved hypothetical protein [Ricinus comm...    89   4e-16
ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [V...    88   8e-16
emb|CBI38834.3| unnamed protein product [Vitis vinifera]               85   9e-15
ref|XP_002302554.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13
ref|XP_002320104.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11

>ref|XP_002511775.1| conserved hypothetical protein [Ricinus communis]
           gi|223548955|gb|EEF50444.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 324

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 54/140 (38%), Positives = 79/140 (56%), Gaps = 25/140 (17%)
 Frame = +2

Query: 5   IAPRAVVPLWTMCTPPTTGVHGGAFFMIPPCGATGPTISHQPQLWAIPTGATPVFNVPAR 184
           + P+ +VP+W +   P+  V  GAFFM+PP  A GP  S+QPQ++A    ATP+ N+ AR
Sbjct: 184 VVPQGLVPMWAI---PSNAVVPGAFFMVPPMAAAGP--SNQPQIFAFQAAATPLVNISAR 238

Query: 185 SMSSYMSAMKPVVGI-------GGNGVQT-----------PAARSGSIS-------TTRT 289
            +SS++S+M+    I       G + V T           P + S  IS       TT T
Sbjct: 239 PISSFVSSMQQAANIAVAVPVSGSSAVSTSKPAKATSVMAPTSSSAPISSNTTTSTTTTT 298

Query: 290 TEMVKDLTLDIGDKRELQFM 349
           T+M++D +L+I DK+ELQFM
Sbjct: 299 TQMLRDFSLEIYDKQELQFM 318


>ref|XP_002272896.1| PREDICTED: transcription factor TCP9-like [Vitis vinifera]
          Length = 360

 Score = 88.2 bits (217), Expect = 8e-16
 Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 22/142 (15%)
 Frame = +2

Query: 2   PIAPRAVVPLWTMCTPPTTGVHGGAFFMIPPCGA-TGPTISHQPQLWAIPTGATPVFNVP 178
           P+AP+ +VP+W +   P+  V  GAF+M+PP  A  GP  S+QPQ+W  P  ATP+ N+ 
Sbjct: 224 PLAPQGLVPMWAI---PSNAV--GAFWMVPPTTAIAGP--SNQPQIWTFPPTATPLINIS 276

Query: 179 ARSMSSYMSAMKPVVGIG----------------GNGVQTPAARSGSIST-----TRTTE 295
           AR +SS++S+M P + +                  +    P++ S + +T     T TT+
Sbjct: 277 ARPISSFVSSMHPTINVASATASAASTVGVKASKASSTMAPSSTSTATTTTTTTSTTTTQ 336

Query: 296 MVKDLTLDIGDKRELQFMEGCS 361
           M++D +L+I DK+ELQFM   S
Sbjct: 337 MLRDFSLEIYDKQELQFMSRSS 358


>emb|CBI38834.3| unnamed protein product [Vitis vinifera]
          Length = 340

 Score = 84.7 bits (208), Expect = 9e-15
 Identities = 47/121 (38%), Positives = 73/121 (60%), Gaps = 1/121 (0%)
 Frame = +2

Query: 2   PIAPRAVVPLWTMCTPPTTGVHGGAFFMIPPCGA-TGPTISHQPQLWAIPTGATPVFNVP 178
           P+AP+ +VP+W +   P+  V  GAF+M+PP  A  GP  S+QPQ+W  P  ATP+ N+ 
Sbjct: 237 PLAPQGLVPMWAI---PSNAV--GAFWMVPPTTAIAGP--SNQPQIWTFPPTATPLINIS 289

Query: 179 ARSMSSYMSAMKPVVGIGGNGVQTPAARSGSISTTRTTEMVKDLTLDIGDKRELQFMEGC 358
           AR +SS++S+M P + +             S + +  + M++D +L+I DK+ELQFM   
Sbjct: 290 ARPISSFVSSMHPTINV------------ASATASAASTMLRDFSLEIYDKQELQFMSRS 337

Query: 359 S 361
           S
Sbjct: 338 S 338


>ref|XP_002302554.1| predicted protein [Populus trichocarpa] gi|222844280|gb|EEE81827.1|
           predicted protein [Populus trichocarpa]
          Length = 348

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 16/129 (12%)
 Frame = +2

Query: 11  PRAVVPLWTMCTPPTTGVHGGAFFMIPPCGATGPTISHQPQLWAIPTGATPVFNVPARSM 190
           P+ +VP+W +   P+  V  GAFFM+P     GP  S+QPQ++  P  ATP+ N+ AR +
Sbjct: 224 PQGLVPMWAI---PSNAVVPGAFFMVP--SIAGP--SNQPQIFTFPAAATPLINISARPI 276

Query: 191 SSYMSAMK-------PVVG---IGGNGVQTPAARSG------SISTTRTTEMVKDLTLDI 322
           SS++S+M+       PV G     G  +  P++ S       S +T RT +M++D +L+I
Sbjct: 277 SSFVSSMQSNMAVAVPVSGSMTAKGISMMAPSSSSACTVSTTSTTTNRTPQMLRDFSLEI 336

Query: 323 GDKRELQFM 349
            DK+ELQFM
Sbjct: 337 YDKQELQFM 345


>ref|XP_002320104.1| predicted protein [Populus trichocarpa] gi|222860877|gb|EEE98419.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 47/138 (34%), Positives = 73/138 (52%), Gaps = 18/138 (13%)
 Frame = +2

Query: 2   PIA--PRAVVPLWTMCTPPTTGVHGGAFFMIPPCGATGPTISHQPQLWAIPTGATPVFNV 175
           P+A  P+ +VP+W +   P+  V  GAFFM+P      P   +QPQ++  P  A+P+ N+
Sbjct: 145 PVAAVPQGLVPMWAI---PSNTVVPGAFFMVPSM----PGQFNQPQIFTFPAAASPLINI 197

Query: 176 PARSMSSYMSAMKPVVGIG--------GNGVQTPAARSGSISTTR--------TTEMVKD 307
             R +SS++S+M+  + +         G G+   A  S S  T R        T  M++D
Sbjct: 198 SPRPISSFVSSMQSNIAVALPVSGSKPGKGISRTAPSSSSAHTIRTPSTTTNSTPHMLRD 257

Query: 308 LTLDIGDKRELQFMEGCS 361
            +L+I DK+ELQFM   S
Sbjct: 258 FSLEIYDKQELQFMSRSS 275


Top