BLASTX nr result

ID: Atractylodes22_contig00050879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050879
         (301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containi...   113   1e-23
emb|CBI28554.3| unnamed protein product [Vitis vinifera]              113   1e-23
emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]   112   4e-23
ref|XP_002328586.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19

>ref|XP_003631274.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic-like [Vitis vinifera]
          Length = 667

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/99 (59%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
 Frame = -3

Query: 296 SLNVYVGSALIDLYMNMGPVDFAMRLFNDLPERNVATWNQLLRGFGEFGTSHKL-KLYSR 120
           S N+YV  +L+DLYM MG  D A+RLF++LP RN+A  N +LRGF E   S  L  +YS 
Sbjct: 143 SSNLYVAGSLVDLYMQMGDCDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFTMYSA 202

Query: 119 MKREGVVPNPLTFCYLIRGFGNGSFVDVGKELHSYAIKV 3
           MK E V PN LTFCYLIRG GNG F D GK+LH +AIKV
Sbjct: 203 MKEECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKV 241


>emb|CBI28554.3| unnamed protein product [Vitis vinifera]
          Length = 1125

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/99 (59%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
 Frame = -3

Query: 296 SLNVYVGSALIDLYMNMGPVDFAMRLFNDLPERNVATWNQLLRGFGEFGTSHKL-KLYSR 120
           S N+YV  +L+DLYM MG  D A+RLF++LP RN+A  N +LRGF E   S  L  +YS 
Sbjct: 143 SSNLYVAGSLVDLYMQMGDCDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFTMYSA 202

Query: 119 MKREGVVPNPLTFCYLIRGFGNGSFVDVGKELHSYAIKV 3
           MK E V PN LTFCYLIRG GNG F D GK+LH +AIKV
Sbjct: 203 MKEECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKV 241


>emb|CAN65318.1| hypothetical protein VITISV_006411 [Vitis vinifera]
          Length = 1052

 Score =  112 bits (279), Expect = 4e-23
 Identities = 58/99 (58%), Positives = 69/99 (69%), Gaps = 1/99 (1%)
 Frame = -3

Query: 296 SLNVYVGSALIDLYMNMGPVDFAMRLFNDLPERNVATWNQLLRGFGEFGTSHKL-KLYSR 120
           S N+YV  +L+DLYM MG  D A+RLF++LP RN+A  N +LRGF E   S  L  +Y  
Sbjct: 143 SSNLYVAGSLVDLYMQMGDCDTALRLFSNLPRRNLAICNLVLRGFCELSRSEWLFNMYPA 202

Query: 119 MKREGVVPNPLTFCYLIRGFGNGSFVDVGKELHSYAIKV 3
           MK E V PN LTFCYLIRG GNG F D GK+LH +AIKV
Sbjct: 203 MKEECVKPNGLTFCYLIRGCGNGRFCDEGKQLHCHAIKV 241


>ref|XP_002328586.1| predicted protein [Populus trichocarpa] gi|222838568|gb|EEE76933.1|
           predicted protein [Populus trichocarpa]
          Length = 699

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/97 (50%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
 Frame = -3

Query: 290 NVYVGSALIDLYMNMGPVDFAMRLFNDLPERNVATWNQLLRGFGEFGTSHK-LKLYSRMK 114
           N+++ ++L+  YM MG  D    LF+++PERN+ATWN +LRGF E G  H+ L +Y  MK
Sbjct: 160 NLFIRTSLVGFYMQMGCFDLGFSLFDEMPERNLATWNLVLRGFCELGRFHELLSVYHEMK 219

Query: 113 REGVVPNPLTFCYLIRGFGNGSFVDVGKELHSYAIKV 3
            +GV PN L+FCYLIRG  N  F   GK+LH + IKV
Sbjct: 220 LDGVHPNGLSFCYLIRGCCNEKFFYEGKQLHCHIIKV 256


>ref|XP_004143068.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 812

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/99 (48%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
 Frame = -3

Query: 296 SLNVYVGSALIDLYMNMGPVDFAMRLFNDLPERNVATWNQLLRGFGEFGTSHKLK-LYSR 120
           +LN+++ S+LI  YM MG    A++LF++LP+RN+A WN LLR   E     KL+  +S+
Sbjct: 143 TLNLFIASSLIGFYMRMGLHTVALKLFDELPQRNIAVWNLLLRWCCELRQFEKLQGFFSK 202

Query: 119 MKREGVVPNPLTFCYLIRGFGNGSFVDVGKELHSYAIKV 3
           M+ EG+ PN LTF YL+RGFGN   +D GK+LH+ A+K+
Sbjct: 203 MQLEGLEPNGLTFSYLLRGFGNEKLLDEGKQLHNRAVKI 241


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