BLASTX nr result

ID: Atractylodes22_contig00050498 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050498
         (424 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15196.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]   182   2e-44
ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containi...   162   3e-38
ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containi...   160   8e-38

>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
          Length = 467

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/138 (60%), Positives = 111/138 (80%)
 Frame = +2

Query: 5   LYVQTNLVNLYVVAGEDDYGGVKNAHKVFDGMTERNVVTWNTLLSGYVKCRDIDGARRVF 184
           ++V+T+LVNLY +AG   Y GV+ A +VFD + +RN+V+WN+LL+GYV+C D+DGARR+F
Sbjct: 65  VFVRTSLVNLYAIAG--GYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 122

Query: 185 AEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARMELDQVTLVAALSACADIGDLK 364
            EMPERN+VSWTT+++GCA    CK+AL L  EM +A ++LDQV LVAALSACA++GDLK
Sbjct: 123 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLK 182

Query: 365 MGRWIHSYIDRSWHMKNE 418
           +G WIHSYID   H  N+
Sbjct: 183 LGTWIHSYIDERLHAGNQ 200



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = +2

Query: 125 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARME 304
           N+L+  Y  C  ID A +VF  M +R+ +SWT++++G A     +EAL + + M +   +
Sbjct: 208 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 267

Query: 305 ---LDQVTLVAALSACADIGDLKMGRWIHSYIDRSW 403
               D +T +  L AC+  G +  GR     +++ W
Sbjct: 268 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 303


>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 553

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/138 (60%), Positives = 111/138 (80%)
 Frame = +2

Query: 5   LYVQTNLVNLYVVAGEDDYGGVKNAHKVFDGMTERNVVTWNTLLSGYVKCRDIDGARRVF 184
           ++V+T+LVNLY +AG   Y GV+ A +VFD + +RN+V+WN+LL+GYV+C D+DGARR+F
Sbjct: 151 VFVRTSLVNLYAIAG--GYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 208

Query: 185 AEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARMELDQVTLVAALSACADIGDLK 364
            EMPERN+VSWTT+++GCA    CK+AL L  EM +A ++LDQV LVAALSACA++GDLK
Sbjct: 209 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLK 268

Query: 365 MGRWIHSYIDRSWHMKNE 418
           +G WIHSYID   H  N+
Sbjct: 269 LGTWIHSYIDERLHAGNQ 286



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = +2

Query: 125 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARME 304
           N+L+  Y  C  ID A +VF  M +R+ +SWT++++G A     +EAL + + M +   +
Sbjct: 294 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 353

Query: 305 ---LDQVTLVAALSACADIGDLKMGRWIHSYIDRSW 403
               D +T +  L AC+  G +  GR     +++ W
Sbjct: 354 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 389


>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
          Length = 569

 Score =  182 bits (463), Expect = 2e-44
 Identities = 83/138 (60%), Positives = 111/138 (80%)
 Frame = +2

Query: 5   LYVQTNLVNLYVVAGEDDYGGVKNAHKVFDGMTERNVVTWNTLLSGYVKCRDIDGARRVF 184
           ++V+T+LVNLY +AG   Y GV+ A +VFD + +RN+V+WN+LL+GYV+C D+DGARR+F
Sbjct: 167 VFVRTSLVNLYAIAG--GYDGVRKARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIF 224

Query: 185 AEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARMELDQVTLVAALSACADIGDLK 364
            EMPERN+VSWTT+++GCA    CK+AL L  EM +A ++LDQV LVAALSACA++GDLK
Sbjct: 225 DEMPERNVVSWTTMIAGCAQIGRCKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLK 284

Query: 365 MGRWIHSYIDRSWHMKNE 418
           +G WIHSYID   H  N+
Sbjct: 285 LGTWIHSYIDERLHAGNQ 302



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 29/96 (30%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
 Frame = +2

Query: 125 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARME 304
           N+L+  Y  C  ID A +VF  M +R+ +SWT++++G A     +EAL + + M +   +
Sbjct: 310 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLGTD 369

Query: 305 ---LDQVTLVAALSACADIGDLKMGRWIHSYIDRSW 403
               D +T +  L AC+  G +  GR     +++ W
Sbjct: 370 EGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKW 405


>ref|XP_004157498.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score =  162 bits (409), Expect = 3e-38
 Identities = 76/137 (55%), Positives = 102/137 (74%)
 Frame = +2

Query: 5   LYVQTNLVNLYVVAGEDDYGGVKNAHKVFDGMTERNVVTWNTLLSGYVKCRDIDGARRVF 184
           LYV+TNL+NLY   G+     +K A  +FD M + NVV WN+LL+GYV+  D DGAR+VF
Sbjct: 160 LYVRTNLINLYANGGDGGDFDLKRARYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVF 219

Query: 185 AEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARMELDQVTLVAALSACADIGDLK 364
            EMPERN+ +WT +V+G A N  CK ALSL  +M +A +ELDQV LVAALSACA++GDL 
Sbjct: 220 DEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLT 279

Query: 365 MGRWIHSYIDRSWHMKN 415
           +G+WIH Y++R+W  ++
Sbjct: 280 LGKWIHGYVERTWRSRH 296



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 33/86 (38%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
 Frame = +2

Query: 125 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCAHNQGC-KEALSLLREML---Q 292
           N L+  Y  C  +D A +VF E+P+RN VSW+++++G A  QGC  EA+ + + ML   Q
Sbjct: 305 NALIHMYASCGVMDLAYKVFEEIPQRNTVSWSSIITGFA-KQGCGVEAIRIFQLMLCSGQ 363

Query: 293 ARMELDQVTLVAALSACADIGDLKMG 370
             +  D++T + AL+AC+  G +  G
Sbjct: 364 NEVRPDEITFIGALTACSHAGLISDG 389


>ref|XP_004137589.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 555

 Score =  160 bits (406), Expect = 8e-38
 Identities = 76/137 (55%), Positives = 102/137 (74%)
 Frame = +2

Query: 5   LYVQTNLVNLYVVAGEDDYGGVKNAHKVFDGMTERNVVTWNTLLSGYVKCRDIDGARRVF 184
           LYV+TNL+NLY   G+     +K A  +FD M + NVV WN+LL+GYV+  D DGAR+VF
Sbjct: 160 LYVRTNLINLYANGGDGGDFDLKRALYLFDEMPDSNVVGWNSLLAGYVRRGDFDGARKVF 219

Query: 185 AEMPERNIVSWTTLVSGCAHNQGCKEALSLLREMLQARMELDQVTLVAALSACADIGDLK 364
            EMPERN+ +WT +V+G A N  CK ALSL  +M +A +ELDQV LVAALSACA++GDL 
Sbjct: 220 DEMPERNVRTWTIMVAGFAQNGQCKLALSLFDQMRRAGVELDQVALVAALSACAELGDLT 279

Query: 365 MGRWIHSYIDRSWHMKN 415
           +G+WIH Y++R+W  ++
Sbjct: 280 LGKWIHGYVERTWRSRH 296



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
 Frame = +2

Query: 125 NTLLSGYVKCRDIDGARRVFAEMPERNIVSWTTLVSGCAHNQGC-KEALSLLREML---Q 292
           N L+  Y  C  +D A ++F E+P+RN VSW+++++G A  QGC  EA+ + + ML   Q
Sbjct: 305 NALIHMYASCGAMDLAYKLFEEIPQRNTVSWSSIITGFA-KQGCGVEAIRIFQLMLCSGQ 363

Query: 293 ARMELDQVTLVAALSACADIGDLKMG 370
             +  D++T + AL+AC+  G +  G
Sbjct: 364 NEVRPDEITFIGALTACSHAGLISDG 389


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