BLASTX nr result

ID: Atractylodes22_contig00050411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050411
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   195   3e-48
ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putativ...   181   5e-44
ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   169   2e-40
ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|2...   169   3e-40
ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   165   4e-39

>ref|XP_002276467.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Vitis
           vinifera]
          Length = 540

 Score =  195 bits (496), Expect = 3e-48
 Identities = 101/153 (66%), Positives = 120/153 (78%)
 Frame = -3

Query: 460 LLLRTKQPKLPTTLMVPPVRLPTTDECFYVRDGNGKSEAQSLTTDQTELIRVKFEIVVKG 281
           LL R  + +LP  L  PP RLPTTDECFYVRD   KS +QSLT  QTE++R + EI V+G
Sbjct: 71  LLCRVAKSRLPVVLP-PPKRLPTTDECFYVRDSGDKSGSQSLTGSQTEMLRRRLEICVRG 129

Query: 280 NCVPAPVLSFAHCNLPQKLLLNIESAGYEIPTPVQMQAIPAALKGQSLLVSAETGSGKTA 101
           +   +P+LSF+ CNLPQKLL NIE+AGYEIPTPVQMQAIPAAL G++LLVSA+TGSGKTA
Sbjct: 130 DFDLSPILSFSSCNLPQKLLQNIEAAGYEIPTPVQMQAIPAALVGKNLLVSADTGSGKTA 189

Query: 100 SYLVPTVSYCANFRKELSEDQKKPLVMVLTPTR 2
           S+LVP VS C + R + S +QK PL MVLTPTR
Sbjct: 190 SFLVPIVSRCTSIRPDHSPNQKNPLAMVLTPTR 222


>ref|XP_002512794.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547805|gb|EEF49297.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 514

 Score =  181 bits (459), Expect = 5e-44
 Identities = 95/137 (69%), Positives = 110/137 (80%)
 Frame = -3

Query: 412 PPVRLPTTDECFYVRDGNGKSEAQSLTTDQTELIRVKFEIVVKGNCVPAPVLSFAHCNLP 233
           PP RL  TDECFYVR+ NG S   SLT DQTEL+R   EI VKG  VP P+LSF+ CNLP
Sbjct: 73  PPRRLAATDECFYVRE-NGTS---SLTNDQTELLRRTLEIHVKGELVPDPILSFSSCNLP 128

Query: 232 QKLLLNIESAGYEIPTPVQMQAIPAALKGQSLLVSAETGSGKTASYLVPTVSYCANFRKE 53
           QKLLLN+E+AGY++PTPVQMQAIP AL G+SLL SA+TGSGKTASYLVP +S CA++R +
Sbjct: 129 QKLLLNLEAAGYDLPTPVQMQAIPTALSGKSLLASADTGSGKTASYLVPIISSCASYRLQ 188

Query: 52  LSEDQKKPLVMVLTPTR 2
            S D +KPL MVLTPTR
Sbjct: 189 HSSD-RKPLAMVLTPTR 204


>ref|XP_004167588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/137 (64%), Positives = 103/137 (75%)
 Frame = -3

Query: 412 PPVRLPTTDECFYVRDGNGKSEAQSLTTDQTELIRVKFEIVVKGNCVPAPVLSFAHCNLP 233
           P  RLP  DECFYV++ N  S   SLT +QTE++R K  I +KG+   AP+LSF+  NLP
Sbjct: 85  PSKRLPAADECFYVKESNYSS---SLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGNLP 141

Query: 232 QKLLLNIESAGYEIPTPVQMQAIPAALKGQSLLVSAETGSGKTASYLVPTVSYCANFRKE 53
           QKL  N+E+AGYE+PTPVQMQAIPAA  G++LLVSAETGSGKT SYLVP VSYCA  R E
Sbjct: 142 QKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARARLE 201

Query: 52  LSEDQKKPLVMVLTPTR 2
               +KKPL MVLTPTR
Sbjct: 202 CFHGEKKPLAMVLTPTR 218


>ref|XP_002320399.1| predicted protein [Populus trichocarpa] gi|222861172|gb|EEE98714.1|
           predicted protein [Populus trichocarpa]
          Length = 524

 Score =  169 bits (427), Expect = 3e-40
 Identities = 87/136 (63%), Positives = 101/136 (74%)
 Frame = -3

Query: 409 PVRLPTTDECFYVRDGNGKSEAQSLTTDQTELIRVKFEIVVKGNCVPAPVLSFAHCNLPQ 230
           P RL  TDECFYVRD         LT+DQTEL+R K EI VKG+ VP P+LSF+ CNLP+
Sbjct: 79  PKRLAATDECFYVRDSESP-----LTSDQTELLRRKLEIHVKGDSVPDPILSFSSCNLPE 133

Query: 229 KLLLNIESAGYEIPTPVQMQAIPAALKGQSLLVSAETGSGKTASYLVPTVSYCANFRKEL 50
           KLL NI++ GY++PTP+QMQ I AAL G+SLL SA+TGSGKTAS+LVP VS CA FR   
Sbjct: 134 KLLHNIQTLGYDMPTPIQMQGIAAALTGKSLLASADTGSGKTASFLVPVVSRCATFRHGN 193

Query: 49  SEDQKKPLVMVLTPTR 2
               KKPL MVLTPTR
Sbjct: 194 ISKSKKPLAMVLTPTR 209


>ref|XP_004145645.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 41-like [Cucumis
           sativus]
          Length = 532

 Score =  165 bits (417), Expect = 4e-39
 Identities = 86/137 (62%), Positives = 101/137 (73%)
 Frame = -3

Query: 412 PPVRLPTTDECFYVRDGNGKSEAQSLTTDQTELIRVKFEIVVKGNCVPAPVLSFAHCNLP 233
           P  RLP  DECFYV++ N      SLT +QTE++R K  I +KG+   AP+LSF+  NLP
Sbjct: 85  PSKRLPAADECFYVKESNYSG---SLTCEQTEMLRKKLGISIKGDLDCAPILSFSFGNLP 141

Query: 232 QKLLLNIESAGYEIPTPVQMQAIPAALKGQSLLVSAETGSGKTASYLVPTVSYCANFRKE 53
           QKL  N+E+AGYE+PTPVQMQAIPAA  G++LLVSAETGSGKT SYLVP VSYCA    E
Sbjct: 142 QKLFQNLETAGYEMPTPVQMQAIPAACLGKNLLVSAETGSGKTVSYLVPIVSYCARACLE 201

Query: 52  LSEDQKKPLVMVLTPTR 2
               +KKPL MVLTPTR
Sbjct: 202 CFHGEKKPLAMVLTPTR 218


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