BLASTX nr result

ID: Atractylodes22_contig00050368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050368
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267...    95   5e-18
emb|CBI33981.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus co...    86   3e-15
ref|XP_003530837.1| PREDICTED: uncharacterized protein LOC100806...    79   4e-13
ref|XP_002326860.1| chromatin remodeling complex subunit [Populu...    79   4e-13

>ref|XP_002279753.2| PREDICTED: uncharacterized protein LOC100267731 [Vitis vinifera]
          Length = 1070

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/86 (54%), Positives = 67/86 (77%)
 Frame = +1

Query: 1    WDSITSSIRKSRHKHELDELKALIDPFVHVHKGTILQERLPGLKDALVVLKPTKIQQTLL 180
            WD +TSSI K     +++EL+A+I+PFVH+HKGTILQE LPGLKD++VVL+P+ +Q+ LL
Sbjct: 751  WDLLTSSIGKIADD-KVEELRAMIEPFVHIHKGTILQENLPGLKDSVVVLQPSDLQRRLL 809

Query: 181  GKMIGSKLSLEHDHIMSIVSVHPSLL 258
              +   K  LE  +++S++SVHPSLL
Sbjct: 810  ESIREKKNPLELGYLVSLISVHPSLL 835


>emb|CBI33981.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 47/86 (54%), Positives = 67/86 (77%)
 Frame = +1

Query: 1   WDSITSSIRKSRHKHELDELKALIDPFVHVHKGTILQERLPGLKDALVVLKPTKIQQTLL 180
           WD +TSSI K     +++EL+A+I+PFVH+HKGTILQE LPGLKD++VVL+P+ +Q+ LL
Sbjct: 235 WDLLTSSIGKIADD-KVEELRAMIEPFVHIHKGTILQENLPGLKDSVVVLQPSDLQRRLL 293

Query: 181 GKMIGSKLSLEHDHIMSIVSVHPSLL 258
             +   K  LE  +++S++SVHPSLL
Sbjct: 294 ESIREKKNPLELGYLVSLISVHPSLL 319


>ref|XP_002517508.1| ATP-dependent helicase, putative [Ricinus communis]
            gi|223543519|gb|EEF45050.1| ATP-dependent helicase,
            putative [Ricinus communis]
          Length = 1138

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 47/96 (48%), Positives = 72/96 (75%), Gaps = 6/96 (6%)
 Frame = +1

Query: 1    WDSITSSIRKS---RHKHE-LDELKALIDPFVHVHKGTILQERLPGLKDALVVLKPTKIQ 168
            W S+T SI K    R K E L+E++A+I PFVHV++G ILQ+RLPGL+DA+V+L+P ++Q
Sbjct: 809  WASLTGSIAKDGNDRFKAEKLEEVRAMIKPFVHVYRGNILQQRLPGLRDAMVILQPVQLQ 868

Query: 169  QTLLGKMIGSKLSLEHDHIMSIVSVHPS--LLCKSI 270
            ++LL K+ G+  +   ++++S+VS+HPS  LL K I
Sbjct: 869  KSLLDKVQGTG-NFHSEYLVSLVSLHPSSLLLLKKI 903


>ref|XP_003530837.1| PREDICTED: uncharacterized protein LOC100806733 [Glycine max]
          Length = 1175

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/70 (51%), Positives = 55/70 (78%)
 Frame = +1

Query: 46   ELDELKALIDPFVHVHKGTILQERLPGLKDALVVLKPTKIQQTLLGKMIGSKLSLEHDHI 225
            ++ +LK+L++PFVHVHKG+ILQ+ LPGL+D ++VLKP ++QQ  L  +  S+  L  +H 
Sbjct: 867  KIKQLKSLMNPFVHVHKGSILQKNLPGLRDCVLVLKPDRLQQETLDIIDSSQNILNFEHK 926

Query: 226  MSIVSVHPSL 255
            +++VSVHPSL
Sbjct: 927  LALVSVHPSL 936


>ref|XP_002326860.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222835175|gb|EEE73610.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 576

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/92 (44%), Positives = 63/92 (68%), Gaps = 6/92 (6%)
 Frame = +1

Query: 1   WDSITSSIRK----SRHKHELDELKALIDPFVHVHKGTILQERLPGLKDALVVLKPTKIQ 168
           W S+T++I K          ++EL+ +I  FVHVHKG +L+ERLPGL+D++V+L+P  +Q
Sbjct: 246 WASLTTAIGKVTDDKLEAQRVEELRKMIWQFVHVHKGGVLRERLPGLRDSVVILQPVHLQ 305

Query: 169 QTLLG--KMIGSKLSLEHDHIMSIVSVHPSLL 258
           +TLL   K I      E ++++S++SVHPSLL
Sbjct: 306 KTLLENVKQINGLDHFEMEYLLSVLSVHPSLL 337


Top