BLASTX nr result

ID: Atractylodes22_contig00050347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050347
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    96   3e-18
gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    95   7e-18
gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [...    88   8e-16
emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]    84   9e-15
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    82   3e-14

>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/105 (45%), Positives = 62/105 (59%)
 Frame = -2

Query: 315  YRQKTVSFRPFQKLAARYYGPFQITQCIGKVAYKLQLPETTRIHPVFHVSQLKRAIGSQQ 136
            YRQ++++ RPF+KLA R+YGPF + Q IG  AYKLQLP +++IHPVFHVS LK+ +G+  
Sbjct: 1464 YRQRSLAKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVVGNTP 1523

Query: 135  GSPMSPPQXXXXXXXXXXXXXXLGVRSSTSATGPIMEVLLKWKGL 1
              P  PP               L VR          E L+KWKGL
Sbjct: 1524 VLPTIPPHIDVDMELVVEPEELLDVRQIRQGKQTFTECLIKWKGL 1568


>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/105 (43%), Positives = 65/105 (61%)
 Frame = -2

Query: 315  YRQKTVSFRPFQKLAARYYGPFQITQCIGKVAYKLQLPETTRIHPVFHVSQLKRAIGSQQ 136
            YR ++++ +  +KLA R+YGPF + + IG+VAY+LQLP   ++HPVFH+SQLK+A+GS Q
Sbjct: 1397 YRHQSLAKKRNEKLAPRFYGPFSVLKRIGQVAYQLQLPLGAKLHPVFHISQLKKAVGSLQ 1456

Query: 135  GSPMSPPQXXXXXXXXXXXXXXLGVRSSTSATGPIMEVLLKWKGL 1
             SP  PPQ              L +RS       + EVL+KW  L
Sbjct: 1457 SSPTIPPQLTNDLVLDAQPESLLNIRSHPQKPAEVTEVLIKWLNL 1501


>gb|AAF13073.1|AC011621_1 putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1661

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 49/107 (45%), Positives = 64/107 (59%)
 Frame = -2

Query: 321  RLYRQKTVSFRPFQKLAARYYGPFQITQCIGKVAYKLQLPETTRIHPVFHVSQLKRAIGS 142
            R YRQ +V+ R  +KL+ RY+GPF++   IG+VAYKLQLPE + IHPVFHVSQLKRA+  
Sbjct: 1488 RPYRQSSVAHRKNEKLSQRYFGPFKVLHRIGQVAYKLQLPEHSTIHPVFHVSQLKRAVPP 1547

Query: 141  QQGSPMSPPQXXXXXXXXXXXXXXLGVRSSTSATGPIMEVLLKWKGL 1
                   P                L +R S + +GP  EVL++W GL
Sbjct: 1548 SFTPQELPKILSPTLEWNTGPEKLLDIRQSNTNSGP--EVLVQWSGL 1592


>emb|CAN70471.1| hypothetical protein VITISV_013478 [Vitis vinifera]
          Length = 1122

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 47/105 (44%), Positives = 61/105 (58%)
 Frame = -2

Query: 315  YRQKTVSFRPFQKLAARYYGPFQITQCIGKVAYKLQLPETTRIHPVFHVSQLKRAIGSQQ 136
            YRQ++V  R  QKLA+R+YGP+QI Q IGKVAYKL LPE ++IHP+FHVS LK+ +G   
Sbjct: 908  YRQQSVFCRASQKLASRFYGPYQIEQRIGKVAYKLNLPEGSKIHPIFHVSLLKKKLGEPN 967

Query: 135  GSPMSPPQXXXXXXXXXXXXXXLGVRSSTSATGPIMEVLLKWKGL 1
             + +  P               L  R     +    E L+KWK L
Sbjct: 968  NTTVELPLTNDEGEIVLXPEGILDTRWVKKGSRIFEESLVKWKRL 1012


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/105 (38%), Positives = 63/105 (60%)
 Frame = -2

Query: 315  YRQKTVSFRPFQKLAARYYGPFQITQCIGKVAYKLQLPETTRIHPVFHVSQLKRAIGSQQ 136
            Y+Q++++ R  +KLA RYYGPF + + IG VAY+L LP  ++IHPVFH+SQL++A+G+  
Sbjct: 1233 YKQRSLAKRLNEKLAPRYYGPFPVLKRIGTVAYELDLPPHSKIHPVFHISQLRKAVGTAP 1292

Query: 135  GSPMSPPQXXXXXXXXXXXXXXLGVRSSTSATGPIMEVLLKWKGL 1
              P+ PP               LG+R +        E+L++W  +
Sbjct: 1293 VFPVLPPLLTTDLVLPSSPSQVLGIRPNPLNQAAPAEILVQWSDM 1337


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