BLASTX nr result

ID: Atractylodes22_contig00050330 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050330
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]    48   1e-11
emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]    50   2e-11
gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]        48   3e-11
emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]    50   6e-11
gb|ABW74566.1| integrase [Boechera divaricarpa]                        56   1e-10

>emb|CAN60366.1| hypothetical protein VITISV_031870 [Vitis vinifera]
          Length = 1274

 Score = 47.8 bits (112), Expect(2) = 1e-11
 Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 6/54 (11%)
 Frame = +3

Query: 279  VFNLGSGIICWCSKKQTTT------RRISSSDSVNTSAMWLRRIL*DMRQEQSE 422
            +F+LGSG +CW SKKQ  T         +++ S    A+WLRRIL D+ QE  E
Sbjct: 1134 MFSLGSGAVCWSSKKQAVTALSSXEAEYTAATSSXCQAVWLRRILADINQEHEE 1187



 Score = 46.2 bits (108), Expect(2) = 1e-11
 Identities = 25/66 (37%), Positives = 33/66 (50%)
 Frame = +1

Query: 61   DIVISVGVICTFIHCPSKSHLEAAKKSIEIYCMNHKFWAMAWSCCRIKIV*LHRRRLGEC 240
            DI  +VGVI  F+HCPSK HL AAK+ +      + F          K+V         C
Sbjct: 1064 DIAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFGIWYGHVQEFKLVGYTDSDWAGC 1123

Query: 241  LEDRRN 258
            LEDR++
Sbjct: 1124 LEDRKS 1129


>emb|CAN72676.1| hypothetical protein VITISV_020406 [Vitis vinifera]
          Length = 1183

 Score = 49.7 bits (117), Expect(2) = 2e-11
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
 Frame = +3

Query: 279  VFNLGSGIICWCSKKQTTTRRISSSDSVNTS-------AMWLRRIL*DMRQEQSE 422
            +F+LGSG +CW SKKQ  T  +SSS++  T+       A+WLRRIL D+ QE  E
Sbjct: 1043 MFSLGSGAVCWSSKKQAVT-ALSSSEAEYTAATSSACQAVWLRRILVDINQEHEE 1096



 Score = 43.9 bits (102), Expect(2) = 2e-11
 Identities = 24/66 (36%), Positives = 32/66 (48%)
 Frame = +1

Query: 61   DIVISVGVICTFIHCPSKSHLEAAKKSIEIYCMNHKFWAMAWSCCRIKIV*LHRRRLGEC 240
            D   +VGVI  F+HCPSK HL AAK+ +      + F          K+V         C
Sbjct: 973  DXAFAVGVISRFMHCPSKQHLGAAKRLLRYIAGTYDFRIWYGHVQEFKLVGYTDSDWAGC 1032

Query: 241  LEDRRN 258
            LEDR++
Sbjct: 1033 LEDRKS 1038


>gb|AAT38786.2| Gag-pol polyprotein, putative [Solanum demissum]
          Length = 1140

 Score = 47.8 bits (112), Expect(3) = 3e-11
 Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
 Frame = +3

Query: 282  FNLGSGIICWCSKKQTTTRR-------ISSSDSVNTSAMWLRRIL*DMRQEQSEANQL 434
            F LGSG+ICWC+KKQ +  +       +++S +VN  A+WLR+IL D+    S+A ++
Sbjct: 1003 FTLGSGVICWCTKKQGSVAQSTAEAEYVAASGAVN-QALWLRKILIDLGFHPSKATEV 1059



 Score = 32.3 bits (72), Expect(3) = 3e-11
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = +2

Query: 125  KLQKRVSRYIA*TINFGQWHGRVAESKLFSYTEED 229
            K  KR+ RYI  TI++G ++ R    KL  +T+ D
Sbjct: 953  KAAKRILRYIRGTIDYGVFYKRTTSMKLLGFTDSD 987



 Score = 32.0 bits (71), Expect(3) = 3e-11
 Identities = 12/26 (46%), Positives = 20/26 (76%)
 Frame = +1

Query: 61   DIVISVGVICTFIHCPSKSHLEAAKK 138
            DI+ +  V+  F+H P+K+HL+AAK+
Sbjct: 932  DIMYATSVLSRFMHLPTKTHLKAAKR 957


>emb|CAN71759.1| hypothetical protein VITISV_020777 [Vitis vinifera]
          Length = 1472

 Score = 49.7 bits (117), Expect(2) = 6e-11
 Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 7/55 (12%)
 Frame = +3

Query: 279  VFNLGSGIICWCSKKQTTTRRISSSDSVNTS-------AMWLRRIL*DMRQEQSE 422
            +F+LGSG +CW SKKQ  T  +SSS++  T+       A+WLRRIL D+ QE  E
Sbjct: 1123 MFSLGSGAVCWSSKKQAVT-ALSSSEAEYTAATSSACQAVWLRRILADINQEHEE 1176



 Score = 42.0 bits (97), Expect(2) = 6e-11
 Identities = 24/66 (36%), Positives = 31/66 (46%)
 Frame = +1

Query: 61   DIVISVGVICTFIHCPSKSHLEAAKKSIEIYCMNHKFWAMAWSCCRIKIV*LHRRRLGEC 240
            DI   V VI  F+HCPSK HL AAK+ +      + F          K+V         C
Sbjct: 1053 DIAFPVEVISRFMHCPSKQHLGAAKRLLRYIVGTYDFGIWYGHVQEFKLVGYTDSDWAGC 1112

Query: 241  LEDRRN 258
            LEDR++
Sbjct: 1113 LEDRKS 1118


>gb|ABW74566.1| integrase [Boechera divaricarpa]
          Length = 1165

 Score = 55.8 bits (133), Expect(2) = 1e-10
 Identities = 30/59 (50%), Positives = 40/59 (67%), Gaps = 7/59 (11%)
 Frame = +3

Query: 279  VFNLGSGIICWCSKKQTTTRRISSSDSVNTS-------AMWLRRIL*DMRQEQSEANQL 434
            VFNLGSG +CW SKKQ  T  +SSS++  T+       A+WLRRIL D++QEQ +A  +
Sbjct: 1025 VFNLGSGAVCWSSKKQNVT-ALSSSEAEYTAATAAACQAVWLRRILADIKQEQEKATTI 1082



 Score = 35.0 bits (79), Expect(2) = 1e-10
 Identities = 18/66 (27%), Positives = 31/66 (46%)
 Frame = +1

Query: 61   DIVISVGVICTFIHCPSKSHLEAAKKSIEIYCMNHKFWAMAWSCCRIKIV*LHRRRLGEC 240
            DI  +V  I  F+H P+K H  AAK+ +       ++     S  + K+V         C
Sbjct: 955  DICFAVSAISRFMHGPTKQHFGAAKRLLRYIARTAEYGLWYCSVSKFKLVGFTDSDWAGC 1014

Query: 241  LEDRRN 258
            ++DR++
Sbjct: 1015 VQDRKS 1020


Top