BLASTX nr result

ID: Atractylodes22_contig00050269 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050269
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sat...    94   1e-17
gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subc...    93   2e-17
gb|AAB82754.1| retrofit [Oryza longistaminata]                         92   3e-17
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846...    92   3e-17
gb|ACY72569.1| unknown [Oryza sativa Japonica Group]                   92   3e-17

>gb|AAK02020.2|AC074283_1 Putative gag-pol polyprotein [Oryza sativa]
            gi|31430072|gb|AAP52036.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1058

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/75 (58%), Positives = 56/75 (74%)
 Frame = +1

Query: 1    KQPTVSKSSTEAEYCVVVYTVQDILWIRSILAELGIIIR*PVRLFCDNVSASYLTVNPVQ 180
            KQ TVS+SSTEAEY  +     +I+W+R +L ELGI    P +L+CDN+ A+YL+VNPV 
Sbjct: 933  KQATVSRSSTEAEYKALANATAEIMWVRKLLEELGISHPGPSQLWCDNIGATYLSVNPVF 992

Query: 181  HDRSKHISIDYHFVR 225
            H R+KHI IDYHFVR
Sbjct: 993  HARTKHIEIDYHFVR 1007


>gb|ABA95721.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 900

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/75 (56%), Positives = 55/75 (73%)
 Frame = +1

Query: 1    KQPTVSKSSTEAEYCVVVYTVQDILWIRSILAELGIIIR*PVRLFCDNVSASYLTVNPVQ 180
            KQ TVS+SSTEAEY  +     +I+W+R +L ELGI+     RL+CDN+ A+Y+T NPV 
Sbjct: 783  KQATVSRSSTEAEYKALANAAAEIIWVRKLLTELGILHPNAARLWCDNLGATYMTANPVF 842

Query: 181  HDRSKHISIDYHFVR 225
            H R+KHI +DYHFVR
Sbjct: 843  HARTKHIEVDYHFVR 857


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/75 (54%), Positives = 56/75 (74%)
 Frame = +1

Query: 1    KQPTVSKSSTEAEYCVVVYTVQDILWIRSILAELGIIIR*PVRLFCDNVSASYLTVNPVQ 180
            KQPTVS+SSTEAEY  V  T  +++W++++L ELGI      +++CDN+ A YL+ NPV 
Sbjct: 1327 KQPTVSRSSTEAEYKAVANTTAELIWVQTLLKELGIESPKAAKIWCDNLGAKYLSANPVF 1386

Query: 181  HDRSKHISIDYHFVR 225
            H R+KHI +DYHFVR
Sbjct: 1387 HARTKHIEVDYHFVR 1401


>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
            distachyon]
          Length = 989

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/75 (57%), Positives = 56/75 (74%)
 Frame = +1

Query: 1    KQPTVSKSSTEAEYCVVVYTVQDILWIRSILAELGIIIR*PVRLFCDNVSASYLTVNPVQ 180
            KQPTVS+SSTEAEY V+     + +WI+S+L ELG+    P  L+CDN+ A+YL+ NPV 
Sbjct: 868  KQPTVSRSSTEAEYKVLANGTAEAIWIQSVLKELGVYQSRPPVLWCDNIGATYLSANPVF 927

Query: 181  HDRSKHISIDYHFVR 225
            H R+KHI ID+HFVR
Sbjct: 928  HARTKHIEIDFHFVR 942


>gb|ACY72569.1| unknown [Oryza sativa Japonica Group]
          Length = 1436

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/75 (54%), Positives = 56/75 (74%)
 Frame = +1

Query: 1    KQPTVSKSSTEAEYCVVVYTVQDILWIRSILAELGIIIR*PVRLFCDNVSASYLTVNPVQ 180
            KQPTVS+SSTEAEY  V  T  +++W++++L ELGI      +++CDN+ A YL+ NPV 
Sbjct: 1318 KQPTVSRSSTEAEYKAVANTTAELIWVQTLLRELGIDSPKAAKIWCDNLGAKYLSANPVF 1377

Query: 181  HDRSKHISIDYHFVR 225
            H R+KHI +DYHFVR
Sbjct: 1378 HARTKHIEVDYHFVR 1392


Top