BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050266
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA22288.1| polyprotein [Oryza australiensis]                     114   8e-24
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   108   4e-22
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   105   4e-21
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   103   1e-20
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   103   1e-20

>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  114 bits (285), Expect = 8e-24
 Identities = 56/130 (43%), Positives = 82/130 (63%)
 Frame = -3

Query: 392 EGKLYILEAPSLNAPTRNAFVEVRGAYDKYQKDAVDVACFMLTSMTDELLRDHEDKDAWE 213
           E K Y+LE P       NA    R  ++K+  DA+D++C ML +M+ EL + +E  DA  
Sbjct: 40  ERKEYVLEVPYPEELPNNATATARRGFEKHTNDALDISCLMLATMSPELQKQYESSDAHT 99

Query: 212 IINSLRTMFIKEAKLERFDTIKTFFAFRMQEGSSVGPYILKMKSYADRLARLGFPLTQEI 33
            I  LR MF  +A+ ERF+T K+ FA R+ EG+ V P+++KM  Y + L +LGFPL+QE+
Sbjct: 100 TIQGLRGMFENQARDERFNTSKSLFACRLVEGNPVSPHVIKMIGYIESLEKLGFPLSQEL 159

Query: 32  AVDFVLGTLP 3
           A D +L +LP
Sbjct: 160 ATDVILQSLP 169


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  108 bits (270), Expect = 4e-22
 Identities = 50/128 (39%), Positives = 82/128 (64%)
 Frame = -3

Query: 386 KLYILEAPSLNAPTRNAFVEVRGAYDKYQKDAVDVACFMLTSMTDELLRDHEDKDAWEII 207
           K ++LE P  + PT NA   ++ AY K   +++DV+C ML +M  +L +  E+ +A+++I
Sbjct: 45  KEHVLEEPIPDVPTENAAAAIKTAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMI 104

Query: 206 NSLRTMFIKEAKLERFDTIKTFFAFRMQEGSSVGPYILKMKSYADRLARLGFPLTQEIAV 27
            +L+ MF  +A+ ERF+  K  F  ++ EG  V P+++KM  Y   L +LGFPL+QE+A 
Sbjct: 105 VALKGMFETQARTERFEISKNLFGCKLAEGGPVSPHVIKMVGYTQSLEKLGFPLSQELAT 164

Query: 26  DFVLGTLP 3
           D +L +LP
Sbjct: 165 DLILASLP 172


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  105 bits (262), Expect = 4e-21
 Identities = 49/128 (38%), Positives = 83/128 (64%)
 Frame = -3

Query: 386 KLYILEAPSLNAPTRNAFVEVRGAYDKYQKDAVDVACFMLTSMTDELLRDHEDKDAWEII 207
           K ++LE P  + P  NA   ++ AY K   +++DV+C ML +M  +L +  E+ +A+++I
Sbjct: 128 KEHVLEEPIPDVPADNAAATLKSAYKKACDESLDVSCLMLAAMNSDLQKQFENIEAYDMI 187

Query: 206 NSLRTMFIKEAKLERFDTIKTFFAFRMQEGSSVGPYILKMKSYADRLARLGFPLTQEIAV 27
            +L+ MF  +A+ +RF+  K  F+ ++ EGS V P+++KM  Y   L +LGFPL+QE+A 
Sbjct: 188 VALKGMFETQARTKRFEISKNLFSCKLAEGSPVSPHMIKMVGYTQSLEKLGFPLSQELAT 247

Query: 26  DFVLGTLP 3
           D +L +LP
Sbjct: 248 DLILASLP 255


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1248

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/130 (41%), Positives = 80/130 (61%)
 Frame = -3

Query: 392 EGKLYILEAPSLNAPTRNAFVEVRGAYDKYQKDAVDVACFMLTSMTDELLRDHEDKDAWE 213
           E K ++L  P       NA    R  ++K   D +D++C ML +M+ EL R +E  DA  
Sbjct: 106 EHKEFVLTEPFPANLPNNAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHT 165

Query: 212 IINSLRTMFIKEAKLERFDTIKTFFAFRMQEGSSVGPYILKMKSYADRLARLGFPLTQEI 33
           II  LR MF  +A+ ERF+T K+ FA R+ EG+ V P+++KM  Y + L +LGFPL++E+
Sbjct: 166 IITGLRNMFEDQARAERFNTSKSLFACRLAEGNLVSPHVIKMIGYTESLDKLGFPLSREL 225

Query: 32  AVDFVLGTLP 3
           A D +L +LP
Sbjct: 226 ATDLILQSLP 235


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
           gi|62701883|gb|AAX92956.1| retrotransposon protein,
           putative, Ty1-copia sub-class [Oryza sativa Japonica
           Group] gi|108864259|gb|ABA92827.2| retrotransposon
           protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1184

 Score =  103 bits (258), Expect = 1e-20
 Identities = 54/130 (41%), Positives = 80/130 (61%)
 Frame = -3

Query: 392 EGKLYILEAPSLNAPTRNAFVEVRGAYDKYQKDAVDVACFMLTSMTDELLRDHEDKDAWE 213
           E K ++L  P       NA    R  ++K   D +D++C ML +M+ EL R +E  DA  
Sbjct: 39  EHKEFVLTQPFPADLPNNAPAAQRREHEKRCNDYLDISCLMLATMSPELQRQYEALDAHT 98

Query: 212 IINSLRTMFIKEAKLERFDTIKTFFAFRMQEGSSVGPYILKMKSYADRLARLGFPLTQEI 33
           II  LR MF  +A+ +RF+T K+ FA R+ EG+ V P+++KM  Y + L +LGFPL+QE+
Sbjct: 99  IITGLRNMFEDQARAKRFNTSKSLFACRLAEGNPVSPHVIKMIGYNETLEKLGFPLSQEL 158

Query: 32  AVDFVLGTLP 3
           A D +L +LP
Sbjct: 159 ATDLILQSLP 168