BLASTX nr result

ID: Atractylodes22_contig00050185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050185
         (302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53706.1| retrotransposon protein, putative, unclassified [...   140   1e-31
gb|ABA98303.2| retrotransposon protein, putative, unclassified [...   140   1e-31
gb|ABA98230.2| retrotransposon protein, putative, unclassified [...   140   1e-31
gb|AAL31657.1|AC079179_12 Putative Zea mays retrotransposon Opie...   140   1e-31
gb|ABF96549.1| retrotransposon protein, putative, unclassified [...   139   2e-31

>gb|AAP53706.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1419

 Score =  140 bits (353), Expect = 1e-31
 Identities = 59/99 (59%), Positives = 85/99 (85%)
 Frame = +1

Query: 1    KQNCVSTSTAEAEYVAAASCRSQVIWMRTQLKDYGFNYSKIPIYCDSKSAIVISSNPVQH 180
            KQ+ V+ STAE+EYVAAASC SQ++W+ + LKDYG  + K+P++CD+ SAI I+ NPVQH
Sbjct: 1298 KQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYGITFEKVPLFCDNTSAINIAKNPVQH 1357

Query: 181  TKTKHIDVRYHFIKDHVERGTIELYFVNTEHQLADLFTK 297
            ++TKHID+R+HF++DHVE+G +EL F++T+ Q+AD+FTK
Sbjct: 1358 SRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTK 1396


>gb|ABA98303.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 776

 Score =  140 bits (353), Expect = 1e-31
 Identities = 59/99 (59%), Positives = 85/99 (85%)
 Frame = +1

Query: 1   KQNCVSTSTAEAEYVAAASCRSQVIWMRTQLKDYGFNYSKIPIYCDSKSAIVISSNPVQH 180
           KQ+ V+ STAE+EYVAAASC SQ++W+ + LKDYG  + K+P++CD+ SAI I+ NPVQH
Sbjct: 655 KQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYGLTFEKVPLFCDNTSAINIAKNPVQH 714

Query: 181 TKTKHIDVRYHFIKDHVERGTIELYFVNTEHQLADLFTK 297
           ++TKHID+R+HF++DHVE+G +EL F++T+ Q+AD+FTK
Sbjct: 715 SRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTK 753


>gb|ABA98230.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1463

 Score =  140 bits (353), Expect = 1e-31
 Identities = 59/99 (59%), Positives = 85/99 (85%)
 Frame = +1

Query: 1    KQNCVSTSTAEAEYVAAASCRSQVIWMRTQLKDYGFNYSKIPIYCDSKSAIVISSNPVQH 180
            KQ+ ++ STAE+EYVAAASC SQ++W+ + LKDYG  + KIP++CD+ SAI I+ NPVQH
Sbjct: 1342 KQSSIAQSTAESEYVAAASCCSQILWLLSTLKDYGLTFEKIPLFCDNTSAINIAKNPVQH 1401

Query: 181  TKTKHIDVRYHFIKDHVERGTIELYFVNTEHQLADLFTK 297
            ++TKHID+R+HF++DHVE+G +EL F++T+ Q+AD+FTK
Sbjct: 1402 SRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFTK 1440


>gb|AAL31657.1|AC079179_12 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
           gi|20042883|gb|AAM08711.1|AC116601_4 Putative Zea mays
           retrotransposon Opie-2 [Oryza sativa Japonica Group]
           gi|31429916|gb|AAP51900.1| retrotransposon protein,
           putative, Ty1-copia subclass [Oryza sativa Japonica
           Group]
          Length = 494

 Score =  140 bits (352), Expect = 1e-31
 Identities = 60/99 (60%), Positives = 84/99 (84%)
 Frame = +1

Query: 1   KQNCVSTSTAEAEYVAAASCRSQVIWMRTQLKDYGFNYSKIPIYCDSKSAIVISSNPVQH 180
           KQ+ V+ STAE+EYVAAASC SQ++W+ + LKDYG  + K+P++CD+ SAI I+ NPVQH
Sbjct: 373 KQSSVAQSTAESEYVAAASCCSQILWLLSTLKDYGLTFEKVPLFCDNTSAINIAKNPVQH 432

Query: 181 TKTKHIDVRYHFIKDHVERGTIELYFVNTEHQLADLFTK 297
           + TKHID+R+HF++DHVE+G +EL F++T+ QLAD+FTK
Sbjct: 433 SHTKHIDIRFHFLRDHVEKGDVELQFLDTKLQLADIFTK 471


>gb|ABF96549.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1071

 Score =  139 bits (350), Expect = 2e-31
 Identities = 58/99 (58%), Positives = 85/99 (85%)
 Frame = +1

Query: 1    KQNCVSTSTAEAEYVAAASCRSQVIWMRTQLKDYGFNYSKIPIYCDSKSAIVISSNPVQH 180
            KQ+ V+ STAE+EYVAAASC SQ++W+ + LKDYG  + K+P++CD+ SAI I+ NPVQH
Sbjct: 950  KQSSVAQSTAESEYVAAASCYSQILWLLSTLKDYGLTFEKVPLFCDNTSAINIAKNPVQH 1009

Query: 181  TKTKHIDVRYHFIKDHVERGTIELYFVNTEHQLADLFTK 297
            ++TKHID+R+HF++DHVE+G +EL F++T+ Q+AD+F+K
Sbjct: 1010 SRTKHIDIRFHFLRDHVEKGDVELQFLDTKLQIADIFSK 1048


Top