BLASTX nr result

ID: Atractylodes22_contig00050161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050161
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACY01928.1| hypothetical protein [Beta vulgaris]                    80   2e-13
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...    78   9e-13
ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216...    73   2e-11
gb|AEV42261.1| hypothetical protein [Beta vulgaris]                    71   1e-10
emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]    71   1e-10

>gb|ACY01928.1| hypothetical protein [Beta vulgaris]
          Length = 1583

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 43/88 (48%), Positives = 63/88 (71%), Gaps = 4/88 (4%)
 Frame = -2

Query: 253 QEEDDDDALNQEIDP----EGTPKVISSEISLNSVVGLTNPKTMKMLGKIKGKIEGDQVI 86
           +EE++  +L + I P    +   ++ S EISLNSV+G+++PKT+KM    +G I G +VI
Sbjct: 377 EEEEEYGSLMENIQPAHPDDSQLEIHSPEISLNSVMGISSPKTLKM----EGTIYGQKVI 432

Query: 85  LMVDPGATHNFISLEAVNWLSIPVNSTR 2
           +MVDPGATHNFISL+ V  L IP++S+R
Sbjct: 433 VMVDPGATHNFISLDTVRRLQIPISSSR 460


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 38/83 (45%), Positives = 58/83 (69%)
 Frame = -2

Query: 253 QEEDDDDALNQEIDPEGTPKVISSEISLNSVVGLTNPKTMKMLGKIKGKIEGDQVILMVD 74
           +E++ + AL+    P    + I  E+SLNSV+GL+NPKTMK+     G I+  +V++M+D
Sbjct: 444 EEDELEGALSGSEAPPSPTEEIPPEVSLNSVIGLSNPKTMKL----SGLIDNHEVVVMID 499

Query: 73  PGATHNFISLEAVNWLSIPVNST 5
           PGATHNF+SL+A++ L IPV  +
Sbjct: 500 PGATHNFLSLKAIDKLGIPVTES 522


>ref|XP_004150327.1| PREDICTED: uncharacterized protein LOC101216833 [Cucumis sativus]
          Length = 2712

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 44/84 (52%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
 Frame = -2

Query: 253  QEEDDDDALN-QEIDPEGTPKVISSEISLNSVVGLTNPKTMKMLGKIKGKIEGDQVILMV 77
            + E D+  LN  EI+PE    V   E+S+NSVVGLTNPKTMK+ GKIK +    +VI+++
Sbjct: 1293 EAEWDETELNCVEINPEDQAIV---ELSINSVVGLTNPKTMKVRGKIKDR----EVIILI 1345

Query: 76   DPGATHNFISLEAVNWLSIPVNST 5
            D GATHNFIS + V  LS+P  +T
Sbjct: 1346 DCGATHNFISDKVVQELSLPTKTT 1369


>gb|AEV42261.1| hypothetical protein [Beta vulgaris]
          Length = 1396

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 33/63 (52%), Positives = 48/63 (76%)
 Frame = -2

Query: 190 ISSEISLNSVVGLTNPKTMKMLGKIKGKIEGDQVILMVDPGATHNFISLEAVNWLSIPVN 11
           ++ EISLNSV+G +NPKT+K+    +G I G+ VI+M+DPGATHNF+S+  V  L+IPV+
Sbjct: 360 VNPEISLNSVMGFSNPKTLKL----RGTIYGEAVIVMIDPGATHNFVSIHTVERLNIPVS 415

Query: 10  STR 2
             +
Sbjct: 416 HAK 418


>emb|CAN78588.1| hypothetical protein VITISV_043911 [Vitis vinifera]
          Length = 2232

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
 Frame = -2

Query: 250  EEDDDDALNQEIDPEGTPKVI----SSEISLNSVVGLTNPKTMKMLGKIKGKIEGDQVIL 83
            EE+DD+  +     E  P +I    + E+SLNSVVGLT P TMK    IKG I   +VI+
Sbjct: 1019 EEEDDNQFDDRATEE--PALIELKDAVELSLNSVVGLTTPGTMK----IKGTIGSKEVII 1072

Query: 82   MVDPGATHNFISLEAVNWLSIPVNST 5
            +VD GATHNF+SLE V  L++P+ +T
Sbjct: 1073 LVDSGATHNFLSLELVQQLTLPLTTT 1098


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