BLASTX nr result

ID: Atractylodes22_contig00050142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050142
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|2...    82   6e-14
ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    80   2e-13
ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    79   3e-13
ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|2...    79   4e-13
ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-...    78   7e-13

>ref|XP_002298873.1| predicted protein [Populus trichocarpa] gi|222846131|gb|EEE83678.1|
            predicted protein [Populus trichocarpa]
          Length = 3728

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 46/79 (58%), Positives = 47/79 (59%)
 Frame = +3

Query: 3    LVVLCGRSSEGRRRVINELVKVLFSFSTLASNSSKGSLLPDKKVLAFVDXXXXXXXXXXX 182
            LVVLCGRS EGRRRVINELVK + SFS L SNS K  LLPDKKV AF D           
Sbjct: 1899 LVVLCGRSGEGRRRVINELVKAMSSFSNLESNSHKNILLPDKKVFAFSDLVYAILSKNAS 1958

Query: 183  XXXXXXXXXXPDIAKGMID 239
                      PDIAK MID
Sbjct: 1959 SSHLPGSGCSPDIAKSMID 1977


>ref|XP_003531107.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3713

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 44/79 (55%), Positives = 47/79 (59%)
 Frame = +3

Query: 3    LVVLCGRSSEGRRRVINELVKVLFSFSTLASNSSKGSLLPDKKVLAFVDXXXXXXXXXXX 182
            LVVLCGRS EGR+RV NELVK L SFS L SNS K SLLPDK++  FVD           
Sbjct: 1893 LVVLCGRSGEGRKRVTNELVKELMSFSNLESNSMKNSLLPDKRLFTFVDLVYSILSKNSS 1952

Query: 183  XXXXXXXXXXPDIAKGMID 239
                      PDIAK MID
Sbjct: 1953 SGSLPGTGYSPDIAKSMID 1971


>ref|XP_003524816.1| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Glycine max]
          Length = 3739

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 44/79 (55%), Positives = 47/79 (59%)
 Frame = +3

Query: 3    LVVLCGRSSEGRRRVINELVKVLFSFSTLASNSSKGSLLPDKKVLAFVDXXXXXXXXXXX 182
            LVVLCGRS EGR+RV NELVK L SFS L SNS K SLLPDK++  FVD           
Sbjct: 1908 LVVLCGRSGEGRKRVTNELVKELMSFSHLESNSMKSSLLPDKRLFTFVDLVYSILSKNSS 1967

Query: 183  XXXXXXXXXXPDIAKGMID 239
                      PDIAK MID
Sbjct: 1968 SGSLPGSGYSPDIAKSMID 1986


>ref|XP_002316781.1| predicted protein [Populus trichocarpa] gi|222859846|gb|EEE97393.1|
            predicted protein [Populus trichocarpa]
          Length = 3663

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 44/79 (55%), Positives = 46/79 (58%)
 Frame = +3

Query: 3    LVVLCGRSSEGRRRVINELVKVLFSFSTLASNSSKGSLLPDKKVLAFVDXXXXXXXXXXX 182
            +VVLCGRS EGRRRVINELVK + SFS L SNS    LLPDKKV AF D           
Sbjct: 1865 IVVLCGRSGEGRRRVINELVKAMSSFSNLESNSHNNVLLPDKKVFAFSDLVYSILSKNAS 1924

Query: 183  XXXXXXXXXXPDIAKGMID 239
                      PDIAK MID
Sbjct: 1925 SSHLPGSGCSPDIAKSMID 1943


>ref|XP_002268896.2| PREDICTED: E3 ubiquitin-protein ligase UPL1-like [Vitis vinifera]
          Length = 4116

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 45/79 (56%), Positives = 46/79 (58%)
 Frame = +3

Query: 3    LVVLCGRSSEGRRRVINELVKVLFSFSTLASNSSKGSLLPDKKVLAFVDXXXXXXXXXXX 182
            LVVLC RS+EGRRRVI ELVK L SFS L  NSSK  LLPDKKV AF D           
Sbjct: 2276 LVVLCSRSTEGRRRVIGELVKALSSFSNLECNSSKSILLPDKKVFAFSDLVYSILSKNSS 2335

Query: 183  XXXXXXXXXXPDIAKGMID 239
                      PDIAK MID
Sbjct: 2336 SSNLPGSGCSPDIAKSMID 2354


Top