BLASTX nr result

ID: Atractylodes22_contig00050104 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050104
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002466092.1| hypothetical protein SORBIDRAFT_01g001040 [S...    72   6e-22
gb|ABA81870.1| unknown [Solanum tuberosum]                             71   7e-22
gb|ACG39955.1| U2 small nuclear ribonucleoprotein A [Zea mays]         70   2e-21
tpg|DAA52522.1| TPA: U2 small nuclear ribonucleoprotein A [Zea m...    70   2e-21
ref|NP_001141036.1| uncharacterized protein LOC100273115 [Zea ma...    70   2e-21

>ref|XP_002466092.1| hypothetical protein SORBIDRAFT_01g001040 [Sorghum bicolor]
           gi|241919946|gb|EER93090.1| hypothetical protein
           SORBIDRAFT_01g001040 [Sorghum bicolor]
          Length = 283

 Score = 71.6 bits (174), Expect(3) = 6e-22
 Identities = 34/39 (87%), Positives = 37/39 (94%)
 Frame = +1

Query: 91  RERELDIRGNKIAIIENLGATEDQFDTIDLSKNEIVNLE 207
           +ERELD+RGNKIA+IENLGATEDQFDTIDLS NEIV LE
Sbjct: 20  KERELDLRGNKIAVIENLGATEDQFDTIDLSDNEIVKLE 58



 Score = 41.6 bits (96), Expect(3) = 6e-22
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 35 MARLTADLIWKSPHFFNAL 91
          M RLTADLIWKSPHFFNA+
Sbjct: 1  MVRLTADLIWKSPHFFNAI 19



 Score = 35.8 bits (81), Expect(3) = 6e-22
 Identities = 21/49 (42%), Positives = 22/49 (44%)
 Frame = +3

Query: 207 NFLNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEID 353
           NF  LNRLGTLL             GEFLPKLH+            EID
Sbjct: 59  NFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEID 107


>gb|ABA81870.1| unknown [Solanum tuberosum]
          Length = 286

 Score = 70.9 bits (172), Expect(3) = 7e-22
 Identities = 34/39 (87%), Positives = 36/39 (92%)
 Frame = +1

Query: 91  RERELDIRGNKIAIIENLGATEDQFDTIDLSKNEIVNLE 207
           RERELD+RGNKI +IENLGATEDQFDTIDLS NEIV LE
Sbjct: 20  RERELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLE 58



 Score = 41.6 bits (96), Expect(3) = 7e-22
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 35 MARLTADLIWKSPHFFNAL 91
          M RLTADLIWKSPHFFNA+
Sbjct: 1  MVRLTADLIWKSPHFFNAI 19



 Score = 36.2 bits (82), Expect(3) = 7e-22
 Identities = 21/49 (42%), Positives = 22/49 (44%)
 Frame = +3

Query: 207 NFLNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEID 353
           NF  LNRLGTLL             GEFLPKLH+            EID
Sbjct: 59  NFPYLNRLGTLLMNNNRITRINPNIGEFLPKLHTLIITSNRLTNLVEID 107


>gb|ACG39955.1| U2 small nuclear ribonucleoprotein A [Zea mays]
          Length = 286

 Score = 70.5 bits (171), Expect(3) = 2e-21
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +1

Query: 91  RERELDIRGNKIAIIENLGATEDQFDTIDLSKNEIVNLE 207
           +ERELD+RGNKIA+IEN+GATEDQFDTIDLS NEIV LE
Sbjct: 20  KERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLE 58



 Score = 41.2 bits (95), Expect(3) = 2e-21
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 35 MARLTADLIWKSPHFFNAL 91
          M RLTADLIWKSPHFFNA+
Sbjct: 1  MVRLTADLIWKSPHFFNAV 19



 Score = 35.8 bits (81), Expect(3) = 2e-21
 Identities = 21/49 (42%), Positives = 22/49 (44%)
 Frame = +3

Query: 207 NFLNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEID 353
           NF  LNRLGTLL             GEFLPKLH+            EID
Sbjct: 59  NFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEID 107


>tpg|DAA52522.1| TPA: U2 small nuclear ribonucleoprotein A [Zea mays]
          Length = 284

 Score = 70.5 bits (171), Expect(3) = 2e-21
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +1

Query: 91  RERELDIRGNKIAIIENLGATEDQFDTIDLSKNEIVNLE 207
           +ERELD+RGNKIA+IEN+GATEDQFDTIDLS NEIV LE
Sbjct: 20  KERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLE 58



 Score = 41.2 bits (95), Expect(3) = 2e-21
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 35 MARLTADLIWKSPHFFNAL 91
          M RLTADLIWKSPHFFNA+
Sbjct: 1  MVRLTADLIWKSPHFFNAV 19



 Score = 35.8 bits (81), Expect(3) = 2e-21
 Identities = 21/49 (42%), Positives = 22/49 (44%)
 Frame = +3

Query: 207 NFLNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEID 353
           NF  LNRLGTLL             GEFLPKLH+            EID
Sbjct: 59  NFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEID 107


>ref|NP_001141036.1| uncharacterized protein LOC100273115 [Zea mays]
           gi|194702320|gb|ACF85244.1| unknown [Zea mays]
           gi|414873964|tpg|DAA52521.1| TPA: hypothetical protein
           ZEAMMB73_675808 [Zea mays]
          Length = 261

 Score = 70.5 bits (171), Expect(3) = 2e-21
 Identities = 33/39 (84%), Positives = 37/39 (94%)
 Frame = +1

Query: 91  RERELDIRGNKIAIIENLGATEDQFDTIDLSKNEIVNLE 207
           +ERELD+RGNKIA+IEN+GATEDQFDTIDLS NEIV LE
Sbjct: 20  KERELDLRGNKIAVIENVGATEDQFDTIDLSDNEIVKLE 58



 Score = 41.2 bits (95), Expect(3) = 2e-21
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = +2

Query: 35 MARLTADLIWKSPHFFNAL 91
          M RLTADLIWKSPHFFNA+
Sbjct: 1  MVRLTADLIWKSPHFFNAV 19



 Score = 35.8 bits (81), Expect(3) = 2e-21
 Identities = 21/49 (42%), Positives = 22/49 (44%)
 Frame = +3

Query: 207 NFLNLNRLGTLLFXXXXXXXXXXXXGEFLPKLHSXXXXXXXXXXXXEID 353
           NF  LNRLGTLL             GEFLPKLH+            EID
Sbjct: 59  NFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTNLAEID 107


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