BLASTX nr result

ID: Atractylodes22_contig00050096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050096
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   185   3e-45
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   184   5e-45
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containi...   178   4e-43

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  185 bits (470), Expect = 3e-45
 Identities = 86/125 (68%), Positives = 106/125 (84%)
 Frame = +1

Query: 1   WIEDSYIKHMGITMDDHLCTALIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGIN 180
           WIE SY++ +GI MD HL TAL+DL+AKCGSIDKA++LFH L KKD+VAYTAMILGCGIN
Sbjct: 356 WIE-SYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGIN 414

Query: 181 GKEQEAIKLFDEMLESKISPNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGLVPTPDHY 360
           GK  +AIKLFDEM++++I PN +TF GLLTA +H G+VEE YHCF SMK+Y LVP+ DHY
Sbjct: 415 GKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYHCFTSMKKYNLVPSVDHY 474

Query: 361 SLMVE 375
            +MV+
Sbjct: 475 GIMVD 479



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
 Frame = +1

Query: 64  LIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGINGKEQEAIKLFDEML--ESKIS 237
           +I  ++KCG +D A +LF ++  KD++ + AMI     N + +EA+KLF+ ML  +  + 
Sbjct: 273 MISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQ 332

Query: 238 PNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGL 339
           P+ +T + +++A S +G +       + M+R G+
Sbjct: 333 PDEMTLASVISACSQLGDLRFGPWIESYMRRLGI 366


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  184 bits (468), Expect = 5e-45
 Identities = 86/125 (68%), Positives = 106/125 (84%)
 Frame = +1

Query: 1   WIEDSYIKHMGITMDDHLCTALIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGIN 180
           WIE SY++ +GI MD HL TAL+DL+AKCGSIDKA++LFH L KKD+VAYTAMILGCGIN
Sbjct: 352 WIE-SYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGIN 410

Query: 181 GKEQEAIKLFDEMLESKISPNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGLVPTPDHY 360
           GK  +AIKLFDEM++++I PNL+TF GLLTA +H G+VEE Y CF SMK+Y LVP+ DHY
Sbjct: 411 GKAIDAIKLFDEMVDAQIFPNLITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHY 470

Query: 361 SLMVE 375
            +MV+
Sbjct: 471 GIMVD 475



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 29/94 (30%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
 Frame = +1

Query: 64  LIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGINGKEQEAIKLFDEML--ESKIS 237
           +I  ++KCG +D A +LF ++  KD++ + AMI     N + +EA+KLF+ ML  +  + 
Sbjct: 269 MISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNMLNPDVNVQ 328

Query: 238 PNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGL 339
           P+ +T + +++A S +G +       + M+R G+
Sbjct: 329 PDEMTLASVISACSQLGDLRFGPWIESYMRRLGI 362


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/125 (68%), Positives = 105/125 (84%)
 Frame = +1

Query: 1   WIEDSYIKHMGITMDDHLCTALIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGIN 180
           WIE SY++ +GI MD HL TAL+DL+AKCGSIDKA++LFH L KKD+VAYTAMILGCGIN
Sbjct: 356 WIE-SYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGIN 414

Query: 181 GKEQEAIKLFDEMLESKISPNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGLVPTPDHY 360
           GK  +AIKLFDEM++++I PN +TF GLLTA +H G+VEE Y CF SMK+Y LVP+ DHY
Sbjct: 415 GKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHY 474

Query: 361 SLMVE 375
            +MV+
Sbjct: 475 GIMVD 479


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  182 bits (462), Expect = 2e-44
 Identities = 85/125 (68%), Positives = 105/125 (84%)
 Frame = +1

Query: 1   WIEDSYIKHMGITMDDHLCTALIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGIN 180
           WIE SY++ +GI MD HL TAL+DL+AKCGSIDKA++LFH L KKD+VAYTAMILGCGIN
Sbjct: 204 WIE-SYMRRLGIEMDGHLATALLDLYAKCGSIDKAYELFHGLRKKDLVAYTAMILGCGIN 262

Query: 181 GKEQEAIKLFDEMLESKISPNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGLVPTPDHY 360
           GK  +AIKLFDEM++++I PN +TF GLLTA +H G+VEE Y CF SMK+Y LVP+ DHY
Sbjct: 263 GKAIDAIKLFDEMVDAQIFPNSITFIGLLTAYNHAGLVEEGYRCFTSMKKYNLVPSVDHY 322

Query: 361 SLMVE 375
            +MV+
Sbjct: 323 GIMVD 327


>ref|XP_003550529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Glycine max]
          Length = 576

 Score =  178 bits (452), Expect = 4e-43
 Identities = 83/125 (66%), Positives = 103/125 (82%)
 Frame = +1

Query: 1   WIEDSYIKHMGITMDDHLCTALIDLHAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGIN 180
           WIE S++   GI +DDHL TALIDL+AKCGSIDKA++LFH L K+D+VAY+AMI GCGIN
Sbjct: 352 WIE-SHMNDFGIVLDDHLATALIDLYAKCGSIDKAYELFHNLRKRDLVAYSAMIYGCGIN 410

Query: 181 GKEQEAIKLFDEMLESKISPNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGLVPTPDHY 360
           GK  +AIKLF++ML   I PNLVT++GLLTA +H G+VE+ Y CFNSMK YGLVP+ DHY
Sbjct: 411 GKASDAIKLFEQMLAECIGPNLVTYTGLLTAYNHAGLVEKGYQCFNSMKDYGLVPSIDHY 470

Query: 361 SLMVE 375
            +MV+
Sbjct: 471 GIMVD 475



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/107 (32%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
 Frame = +1

Query: 37  TMDDHLCTALIDL---HAKCGSIDKAFKLFHELHKKDVVAYTAMILGCGINGKEQEAIKL 207
           TM    C + I +   ++K G +D A KLF ++  KD+++Y AMI     N K +EA++L
Sbjct: 257 TMPRRNCVSWITMIAGYSKGGDVDSARKLFDQMDHKDLLSYNAMIACYAQNSKPKEALEL 316

Query: 208 FDEMLESKI--SPNLVTFSGLLTALSHVGMVEESYHCFNSMKRYGLV 342
           F++ML+  I   P+ +T + +++A S +G +E  +   + M  +G+V
Sbjct: 317 FNDMLKQDIYVHPDKMTLASVISACSQLGDLEHWWWIESHMNDFGIV 363


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