BLASTX nr result

ID: Atractylodes22_contig00050088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050088
         (371 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003556722.1| PREDICTED: uncharacterized protein LOC100797...    57   2e-06
ref|XP_003551223.1| PREDICTED: uncharacterized protein LOC100781...    55   5e-06
gb|AER13160.1| putative non-LTR retroelement [Phaseolus vulgaris]      55   8e-06

>ref|XP_003556722.1| PREDICTED: uncharacterized protein LOC100797642 [Glycine max]
          Length = 2447

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 38/125 (30%), Positives = 55/125 (44%), Gaps = 6/125 (4%)
 Frame = +1

Query: 1    KLRLCRLPVREYLDRIGIDLDSILCPRCCSGIETLNNCFVECHQFHSIWVNFLCWWGLEG 180
            KL  CRLP R  L R G+++    CP C    E + + F  C +   +W   + W    G
Sbjct: 966  KLLSCRLPTRANLSRRGVNIQDTACPLCGYVQEEVGHLFFNCKKILGLWWESMSWIQAMG 1025

Query: 181  -TQLSTVDDVLNLLDCFPSNEFHPCVTVVTWTAL-YFIWRNRNSLIFPS----PTNQVSD 342
               +S VD  L   D F +   H       W AL   IW++RN LIF +    P   + D
Sbjct: 1026 PLSVSPVDHFLQFCDGFGAERNH-STCCGWWVALTSTIWKHRNFLIFQNKPFEPQKVMED 1084

Query: 343  IVYEV 357
             ++ +
Sbjct: 1085 AMFSI 1089


>ref|XP_003551223.1| PREDICTED: uncharacterized protein LOC100781466 [Glycine max]
          Length = 744

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
 Frame = +1

Query: 1   KLRLCRLPVREYLDRIGIDLDSILCPRCCSGIETLNNCFVECHQFHSIWVNFLCWWGLEG 180
           KL   RLP R  L R G+++    CP C  G E + + F  C +   +W   + W    G
Sbjct: 507 KLLSGRLPTRANLSRRGVNIQDTACPLCGDGQEEVGHLFFNCKKILGLWWESMSWIQAMG 566

Query: 181 -TQLSTVDDVLNLLDCFPSNEFHPCVTVVTWTAL-YFIWRNRNSLIF 315
              +S VD  L   D F +   H       W AL   IW++RN LIF
Sbjct: 567 PLSVSPVDHFLQFCDGFGAERNH-STCCGWWVALTSTIWKHRNFLIF 612


>gb|AER13160.1| putative non-LTR retroelement [Phaseolus vulgaris]
          Length = 216

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/119 (30%), Positives = 52/119 (43%), Gaps = 1/119 (0%)
 Frame = +1

Query: 16  RLPVREYLDRIGIDLDSILCPRCCSGIETLNNCFVECHQFHSIWVNFLCWWGLEGTQLST 195
           R+P RE L R GI L+SI C  C    E+  + F+EC     +W   L W G+   Q + 
Sbjct: 48  RIPTREGLSRRGIQLNSIACVLCQIKEESCQHLFIECLYAKQVWSLCLKWLGILFVQHND 107

Query: 196 VDDVLNLLDCFPSNEFHPCVTVVTWTALY-FIWRNRNSLIFPSPTNQVSDIVYEVQLLS 369
           + D         ++     V    W A+   IW  RN+++F      V +I    QL S
Sbjct: 108 LKDHFVSFHIAQASSKQNLVLKGVWAAIVRCIWDQRNTILFKQGVVDVEEIFQMAQLKS 166


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