BLASTX nr result

ID: Atractylodes22_contig00050040 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050040
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG12527.1|AC015446_8 Hypothetical Protein [Arabidopsis thali...   160   1e-37
ref|NP_001042010.2| Os01g0146700 [Oryza sativa Japonica Group] g...   147   1e-33
gb|AAA33448.1| reverse transcriptase, partial [Zea mays]              143   1e-32
pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize tr...   143   1e-32
ref|XP_002440449.1| hypothetical protein SORBIDRAFT_09g001135 [S...   139   2e-31

>gb|AAG12527.1|AC015446_8 Hypothetical Protein [Arabidopsis thaliana]
          Length = 471

 Score =  160 bits (405), Expect = 1e-37
 Identities = 71/112 (63%), Positives = 92/112 (82%)
 Frame = +2

Query: 5   EFDNNHLHTLFAKHGIQFRFSCPKTSQQNGKAERMIRTINNVIRTLLFQAHLPPTFWVEA 184
           +++N+  H  FAKHGI+F FSCP TSQQNG++ERMIRTINN +RT+L QAHLP TFWVEA
Sbjct: 12  KYNNSQFHDFFAKHGIRFCFSCPYTSQQNGRSERMIRTINNAVRTMLLQAHLPNTFWVEA 71

Query: 185 LHMATYLLNLLPSTAINNEIPYTRLFHKTPEYSNLRIFGCLCYPHLHSPHKL 340
           L+   ++LNL PST INN IP++ LF+KTP Y++LR+FG LCYPH ++ +KL
Sbjct: 72  LNNVVHILNLHPSTLINNRIPFSVLFNKTPSYNHLRVFGSLCYPHTNTQNKL 123


>ref|NP_001042010.2| Os01g0146700 [Oryza sativa Japonica Group]
           gi|255672871|dbj|BAF03924.2| Os01g0146700 [Oryza sativa
           Japonica Group]
          Length = 725

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/115 (56%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
 Frame = +2

Query: 5   EFDNNHLHTLFAKHGIQFRFSCPKTSQQNGKAERMIRTINNVIRTLLFQAHLPPTFWVEA 184
           EFDN+   T F  HG+ FR SCP TSQQNG+AER +RT+NN++R+LLFQA LPP +WVEA
Sbjct: 213 EFDNSPARTFFLSHGVAFRMSCPYTSQQNGRAERSLRTLNNILRSLLFQACLPPVYWVEA 272

Query: 185 LHMATYLLNLLPSTAINNEIPYTRLFHKTPEYSNLRIFGCLCYPHLHS--PHKLA 343
           LH AT L+N +P+  +++  PY  L+   P Y +LR+FGC CYP++ S  PHKLA
Sbjct: 273 LHTATLLVNRIPTKTLSSSTPYFHLYSTQPTYDHLRVFGCACYPNMSSTAPHKLA 327


>gb|AAA33448.1| reverse transcriptase, partial [Zea mays]
          Length = 700

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/115 (58%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 5   EFDNNHLHTLFAKHGIQFRFSCPKTSQQNGKAERMIRTINNVIRTLLFQAHLPPTFWVEA 184
           EFDNN   + F  HG+Q R SCP TS QNG+AERMIRT  N+IR LLFQA LP T+W EA
Sbjct: 5   EFDNNASRSFFLTHGVQLRLSCPYTSAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEA 64

Query: 185 LHMATYLLNLLPSTAINNEIPYTRLFHKTPEYSNLRIFGCLCYPHLH--SPHKLA 343
           LH AT+LLN LPS A+++  P+  L+  TP Y +LR+FGC CYP+    +PHKL+
Sbjct: 65  LHTATHLLNRLPSKAVSHPTPHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLS 119


>pir||S27768 RNA-directed DNA polymerase (EC 2.7.7.49) - maize transposon
           (fragment)
          Length = 699

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/115 (58%), Positives = 83/115 (72%), Gaps = 2/115 (1%)
 Frame = +2

Query: 5   EFDNNHLHTLFAKHGIQFRFSCPKTSQQNGKAERMIRTINNVIRTLLFQAHLPPTFWVEA 184
           EFDNN   + F  HG+Q R SCP TS QNG+AERMIRT  N+IR LLFQA LP T+W EA
Sbjct: 5   EFDNNASRSFFLTHGVQLRLSCPYTSAQNGRAERMIRTTTNMIRCLLFQASLPATYWAEA 64

Query: 185 LHMATYLLNLLPSTAINNEIPYTRLFHKTPEYSNLRIFGCLCYPHLH--SPHKLA 343
           LH AT+LLN LPS A+++  P+  L+  TP Y +LR+FGC CYP+    +PHKL+
Sbjct: 65  LHTATHLLNRLPSKAVSHPTPHFALYGTTPSYDHLRVFGCACYPNTSATAPHKLS 119


>ref|XP_002440449.1| hypothetical protein SORBIDRAFT_09g001135 [Sorghum bicolor]
           gi|241945734|gb|EES18879.1| hypothetical protein
           SORBIDRAFT_09g001135 [Sorghum bicolor]
          Length = 488

 Score =  139 bits (351), Expect = 2e-31
 Identities = 68/115 (59%), Positives = 78/115 (67%), Gaps = 2/115 (1%)
 Frame = +2

Query: 5   EFDNNHLHTLFAKHGIQFRFSCPKTSQQNGKAERMIRTINNVIRTLLFQAHLPPTFWVEA 184
           EFDN+     F  HG+Q R SCP TS QNGKAERMIRT N+ IRTLL QA LP  FW E+
Sbjct: 15  EFDNSTSRAFFLSHGVQLRMSCPYTSSQNGKAERMIRTTNDTIRTLLLQASLPARFWAES 74

Query: 185 LHMATYLLNLLPSTAINNEIPYTRLFHKTPEYSNLRIFGCLCYPH--LHSPHKLA 343
           LH +TYLLN LPSTA     P+  LF   P Y +LR+FGC CYP+    +PHKLA
Sbjct: 75  LHTSTYLLNRLPSTACPAPTPHHALFGTPPRYDHLRVFGCACYPNTTATAPHKLA 129


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