BLASTX nr result

ID: Atractylodes22_contig00050011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00050011
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002320703.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   122   4e-26
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              122   4e-26

>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  134 bits (336), Expect = 1e-29
 Identities = 61/81 (75%), Positives = 73/81 (90%)
 Frame = +2

Query: 62  QWPIKQVTKSNFPDSLHEIKNHISDSDFVAVSLQKTGSYSSSWQRVLPFDTAETAYLKAK 241
           QW +KQVTKSNF D+L +IK+H+S+SDFVAVSLQ TG +S+ WQRV PFDTA+TAYLKAK
Sbjct: 27  QWSVKQVTKSNFADTLEDIKSHVSNSDFVAVSLQNTGFFSAPWQRVSPFDTADTAYLKAK 86

Query: 242 YAAERFQILQFAVCPFSIRAS 304
           YAAERFQ+L FAVCPF++RAS
Sbjct: 87  YAAERFQVLHFAVCPFTVRAS 107


>ref|XP_002320703.1| predicted protein [Populus trichocarpa] gi|222861476|gb|EEE99018.1|
           predicted protein [Populus trichocarpa]
          Length = 544

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/81 (76%), Positives = 73/81 (90%)
 Frame = +2

Query: 62  QWPIKQVTKSNFPDSLHEIKNHISDSDFVAVSLQKTGSYSSSWQRVLPFDTAETAYLKAK 241
           QW IKQVTKSNF D+L +IK+H+S+SDFVAVSLQ TGS+S+ WQRV PFDTA+TAYLKAK
Sbjct: 27  QWSIKQVTKSNFADTLKDIKSHVSNSDFVAVSLQNTGSFSAPWQRVSPFDTADTAYLKAK 86

Query: 242 YAAERFQILQFAVCPFSIRAS 304
           YAAERFQ+L FAVCP ++RAS
Sbjct: 87  YAAERFQVLHFAVCPITVRAS 107


>ref|XP_002326981.1| predicted protein [Populus trichocarpa] gi|222835296|gb|EEE73731.1|
           predicted protein [Populus trichocarpa]
          Length = 626

 Score =  134 bits (336), Expect = 1e-29
 Identities = 62/81 (76%), Positives = 73/81 (90%)
 Frame = +2

Query: 62  QWPIKQVTKSNFPDSLHEIKNHISDSDFVAVSLQKTGSYSSSWQRVLPFDTAETAYLKAK 241
           QW IKQVTKSNF D+L +IK+H+S+SDFVAVSLQ TGS+S+ WQRV PFDTA+TAYLKAK
Sbjct: 27  QWSIKQVTKSNFADTLKDIKSHVSNSDFVAVSLQNTGSFSAPWQRVSPFDTADTAYLKAK 86

Query: 242 YAAERFQILQFAVCPFSIRAS 304
           YAAERFQ+L FAVCP ++RAS
Sbjct: 87  YAAERFQVLHFAVCPITVRAS 107


>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/90 (62%), Positives = 72/90 (80%)
 Frame = +2

Query: 35  KKLGGGRRPQWPIKQVTKSNFPDSLHEIKNHISDSDFVAVSLQKTGSYSSSWQRVLPFDT 214
           ++ G   + +W +KQVTKSNF  +L  +K  IS SDFVAVSLQKTGS+S+ W RVLPFDT
Sbjct: 4   QRRGLSTKREWRVKQVTKSNFSQTLESLKPQISQSDFVAVSLQKTGSFSAPWHRVLPFDT 63

Query: 215 AETAYLKAKYAAERFQILQFAVCPFSIRAS 304
            +TAY KA++AA++FQ+ QFAVCPFS+RAS
Sbjct: 64  PQTAYSKARFAADKFQVFQFAVCPFSVRAS 93


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/90 (62%), Positives = 72/90 (80%)
 Frame = +2

Query: 35  KKLGGGRRPQWPIKQVTKSNFPDSLHEIKNHISDSDFVAVSLQKTGSYSSSWQRVLPFDT 214
           ++ G   + +W +KQVTKSNF  +L  +K  IS SDFVAVSLQKTGS+S+ W RVLPFDT
Sbjct: 4   QRRGLSTKREWRVKQVTKSNFSQTLESLKPQISQSDFVAVSLQKTGSFSAPWHRVLPFDT 63

Query: 215 AETAYLKAKYAAERFQILQFAVCPFSIRAS 304
            +TAY KA++AA++FQ+ QFAVCPFS+RAS
Sbjct: 64  PQTAYSKARFAADKFQVFQFAVCPFSVRAS 93


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