BLASTX nr result

ID: Atractylodes22_contig00049958 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049958
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    75   1e-13
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         72   2e-13
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          72   3e-13
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            72   3e-13
gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subc...    71   4e-13

>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 75.1 bits (183), Expect(2) = 1e-13
 Identities = 34/75 (45%), Positives = 47/75 (62%)
 Frame = +2

Query: 29  ELSRRGLLGGHKVCDLQLCEHYVLANRKGLSSQLVFSQQKRPLEYLHSDLWGSTRVSFNG 208
           EL ++G+LG +K+ DL  CEH V      +       + +  L+Y+HSDLWG +RV   G
Sbjct: 408 ELEKQGVLGNYKLTDLPFCEHCVFGKATRVKFAKAIHETQNQLDYIHSDLWGPSRVPSIG 467

Query: 209 GATYVLTIIDEYSRK 253
           GA Y LT+ID+YSRK
Sbjct: 468 GARYFLTLIDDYSRK 482



 Score = 25.8 bits (55), Expect(2) = 1e-13
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = +1

Query: 262 FFLKHKGDVLSTFKEWK 312
           +FLK+K +    FKEWK
Sbjct: 486 YFLKNKSETFLKFKEWK 502


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 72.0 bits (175), Expect(2) = 2e-13
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +2

Query: 29  ELSRRGLLGGHKVCDLQLCEHYVLANRKGLSSQLVFSQQKRPLEYLHSDLWGSTRVSFNG 208
           ELS+RGLL G  +  L+ CEH +    K +         +  L+Y+HSDLWG  R +  G
Sbjct: 450 ELSKRGLLDGQSISKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 509

Query: 209 GATYVLTIIDEYSRK 253
           GA Y++TI+D+YSRK
Sbjct: 510 GARYMMTIVDDYSRK 524



 Score = 28.1 bits (61), Expect(2) = 2e-13
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 262 FFLKHKGDVLSTFKEWK 312
           +FLKHK    + FKEWK
Sbjct: 528 YFLKHKYQAFNVFKEWK 544


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 72.0 bits (175), Expect(2) = 3e-13
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +2

Query: 29  ELSRRGLLGGHKVCDLQLCEHYVLANRKGLSSQLVFSQQKRPLEYLHSDLWGSTRVSFNG 208
           ELS+RGLL G  +  L+ CEH +    K +         +  L+Y+HSDLWG  R +  G
Sbjct: 282 ELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 341

Query: 209 GATYVLTIIDEYSRK 253
           GA Y++TI+D+YSRK
Sbjct: 342 GARYIMTIVDDYSRK 356



 Score = 27.7 bits (60), Expect(2) = 3e-13
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 262 FFLKHKGDVLSTFKEWK 312
           +FLKHK      FKEWK
Sbjct: 360 YFLKHKYQAFDVFKEWK 376


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 72.0 bits (175), Expect(2) = 3e-13
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +2

Query: 29  ELSRRGLLGGHKVCDLQLCEHYVLANRKGLSSQLVFSQQKRPLEYLHSDLWGSTRVSFNG 208
           ELS+RGLL G  +  L+ CEH +    K +         +  L+Y+HSDLWG  R +  G
Sbjct: 282 ELSKRGLLDGQSIGKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 341

Query: 209 GATYVLTIIDEYSRK 253
           GA Y++TI+D+YSRK
Sbjct: 342 GARYIMTIVDDYSRK 356



 Score = 27.7 bits (60), Expect(2) = 3e-13
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 262 FFLKHKGDVLSTFKEWK 312
           +FLKHK      FKEWK
Sbjct: 360 YFLKHKYQAFDVFKEWK 376


>gb|AAP53216.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1262

 Score = 71.2 bits (173), Expect(2) = 4e-13
 Identities = 33/75 (44%), Positives = 46/75 (61%)
 Frame = +2

Query: 29  ELSRRGLLGGHKVCDLQLCEHYVLANRKGLSSQLVFSQQKRPLEYLHSDLWGSTRVSFNG 208
           ELS+RGLL G  +  L+ CEH +    K +         +  L+Y+HSDLWG  R +  G
Sbjct: 465 ELSKRGLLDGQSIKKLKFCEHCIFGKHKRVKFNTSTHTTEGILDYVHSDLWGPARKTSFG 524

Query: 209 GATYVLTIIDEYSRK 253
           GA Y++TI+D+YSRK
Sbjct: 525 GARYMMTIVDDYSRK 539



 Score = 27.7 bits (60), Expect(2) = 4e-13
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +1

Query: 262 FFLKHKGDVLSTFKEWK 312
           +FLKHK      FKEWK
Sbjct: 543 YFLKHKYQAFDVFKEWK 559


Top