BLASTX nr result

ID: Atractylodes22_contig00049943 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049943
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containi...   139   3e-31
emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]   139   3e-31
ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CBI22140.3| unnamed protein product [Vitis vinifera]              135   3e-30
ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   128   6e-28

>ref|XP_003635554.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
           gi|296083555|emb|CBI23551.3| unnamed protein product
           [Vitis vinifera]
          Length = 580

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/89 (73%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   NSISCITMIGGYSKCGDVESACELFGEMGRKDHLLYNAMIACYAKNSRPKEALQLFNEML 181
           N++S +TMI GYSKCGDV+SACELF ++G KD LL+NAMIACYA+NSRPKEAL+LFN ML
Sbjct: 266 NNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNML 325

Query: 182 QPNQNIQPDKTTLATVISACSQLGDLALG 268
            P+ N+QPD+ TLA+VISACSQLGDL  G
Sbjct: 326 NPDVNVQPDEMTLASVISACSQLGDLRFG 354


>emb|CAN64316.1| hypothetical protein VITISV_027915 [Vitis vinifera]
          Length = 841

 Score =  139 bits (349), Expect = 3e-31
 Identities = 65/89 (73%), Positives = 78/89 (87%)
 Frame = +2

Query: 2   NSISCITMIGGYSKCGDVESACELFGEMGRKDHLLYNAMIACYAKNSRPKEALQLFNEML 181
           N++S +TMI GYSKCGDV+SACELF ++G KD LL+NAMIACYA+NSRPKEAL+LFN ML
Sbjct: 262 NNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPKEALKLFNNML 321

Query: 182 QPNQNIQPDKTTLATVISACSQLGDLALG 268
            P+ N+QPD+ TLA+VISACSQLGDL  G
Sbjct: 322 NPDVNVQPDEMTLASVISACSQLGDLRFG 350


>ref|XP_002270938.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g22760-like [Vitis vinifera]
          Length = 580

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +2

Query: 2   NSISCITMIGGYSKCGDVESACELFGEMGRKDHLLYNAMIACYAKNSRPKEALQLFNEML 181
           N++S +TMI GYSKCGDV+SACELF ++G KD LL+NAMIACYA+NSRP EAL LFN ML
Sbjct: 266 NNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNML 325

Query: 182 QPNQNIQPDKTTLATVISACSQLGDLALG 268
            P  N+QPD+ TLA+VISACSQLGDL  G
Sbjct: 326 NPYVNVQPDEMTLASVISACSQLGDLRFG 354


>emb|CBI22140.3| unnamed protein product [Vitis vinifera]
          Length = 428

 Score =  135 bits (340), Expect = 3e-30
 Identities = 64/89 (71%), Positives = 75/89 (84%)
 Frame = +2

Query: 2   NSISCITMIGGYSKCGDVESACELFGEMGRKDHLLYNAMIACYAKNSRPKEALQLFNEML 181
           N++S +TMI GYSKCGDV+SACELF ++G KD LL+NAMIACYA+NSRP EAL LFN ML
Sbjct: 114 NNVSWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAMIACYAQNSRPNEALNLFNNML 173

Query: 182 QPNQNIQPDKTTLATVISACSQLGDLALG 268
            P  N+QPD+ TLA+VISACSQLGDL  G
Sbjct: 174 NPYVNVQPDEMTLASVISACSQLGDLRFG 202


>ref|XP_003634255.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g22760-like [Vitis vinifera]
          Length = 583

 Score =  128 bits (321), Expect = 6e-28
 Identities = 61/89 (68%), Positives = 73/89 (82%)
 Frame = +2

Query: 2   NSISCITMIGGYSKCGDVESACELFGEMGRKDHLLYNAMIACYAKNSRPKEALQLFNEML 181
           NS S +TMI GYSKCGDV+SACELF ++G KD LL+NA+IACYA+NS+ KEAL+LFN ML
Sbjct: 248 NSASWMTMISGYSKCGDVDSACELFDQVGGKDLLLFNAVIACYAQNSKLKEALKLFNMML 307

Query: 182 QPNQNIQPDKTTLATVISACSQLGDLALG 268
            PN N+QPD+ TLA+VIS CSQ GD   G
Sbjct: 308 HPNVNVQPDEMTLASVISPCSQFGDFRFG 336


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