BLASTX nr result

ID: Atractylodes22_contig00049911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049911
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsi...    60   1e-07
gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]               58   9e-07
gb|ABA27027.1| TO70-3 [Taraxacum officinale]                           57   1e-06
gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsi...    57   2e-06
ref|ZP_10246640.1| hypothetical protein NITHO_6470001 [Nitrolanc...    56   3e-06

>gb|AAD22283.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1787

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 25/56 (44%), Positives = 36/56 (64%)
 Frame = -3

Query: 278  KIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRGWSASHLKLYH 111
            K+F+NT +  + KL A WEGPY I+ V+  G Y     D  PIPR W++++LK Y+
Sbjct: 1731 KVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWNSANLKRYY 1786


>gb|AAF79254.1|AC023279_3 F12K21.6 [Arabidopsis thaliana]
          Length = 755

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 22/56 (39%), Positives = 34/56 (60%)
 Frame = -3

Query: 278 KIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRGWSASHLKLYH 111
           K+FQNT + ++ KL   WEGPY I+ ++    Y   D   + +PR W+A HL+ Y+
Sbjct: 699 KVFQNTAEPNTGKLGTNWEGPYLISKIVRPEVYELADLSGKAVPRSWNAMHLRKYY 754


>gb|ABA27027.1| TO70-3 [Taraxacum officinale]
          Length = 97

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 25/52 (48%), Positives = 31/52 (59%)
 Frame = -3

Query: 278 KIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRGWSASHL 123
           K FQNT+D +  KLA  WEGPY I +  G G Y   D +   +PR W+A HL
Sbjct: 46  KTFQNTKDPADGKLAPKWEGPYVINSKAGKGVYWLADMEGTLLPRSWNAIHL 97


>gb|AAD03367.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1329

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 21/56 (37%), Positives = 37/56 (66%)
 Frame = -3

Query: 278  KIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRGWSASHLKLYH 111
            ++ QN  +  + KL  +WEGPY+IT+V+ NG YR  + + + + R W++ HLK ++
Sbjct: 1273 RVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSMHLKRFY 1328


>ref|ZP_10246640.1| hypothetical protein NITHO_6470001 [Nitrolancetus hollandicus Lb]
           gi|390170603|emb|CCF85985.1| hypothetical protein
           NITHO_6470001 [Nitrolancetus hollandicus Lb]
          Length = 60

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 21/56 (37%), Positives = 36/56 (64%)
 Frame = -3

Query: 278 KIFQNTRDASSSKLAAAWEGPYQITNVIGNGTYRPCDKDNRPIPRGWSASHLKLYH 111
           ++F N ++  + KL   WEGPY +T V+ NG Y+  D ++RP+ R W+  +LK ++
Sbjct: 4   RVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYKLKDLEDRPVKRPWNVINLKKFY 59


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