BLASTX nr result

ID: Atractylodes22_contig00049904 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049904
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    60   1e-07
dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis t...    59   5e-07
emb|CAN67528.1| hypothetical protein VITISV_004308 [Vitis vinifera]    57   2e-06
ref|XP_002280329.2| PREDICTED: cucumisin-like [Vitis vinifera]         55   8e-06

>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 8/92 (8%)
 Frame = -3

Query: 405 VSVKLSGNRNYHLWRRQMLCLLKTYDVYGFVDGSFARPIAST--DKLEKQY------NKL 250
           +SVKL G+ NY  W+ Q L LL+ +D+ GF+DG+ A P   T    L   Y      +  
Sbjct: 21  ISVKLDGSHNYLAWKMQFLNLLRGHDLMGFIDGTEACPPKHTASGSLNPAYVVWQKKDVC 80

Query: 249 VKGWIFCSVSEGVLGTVIDIKSAEKVWDKLKS 154
           + GWI  S+SE ++ T+  ++++++VW  L++
Sbjct: 81  LLGWILASLSEKLVSTIYGLETSKQVWTALQT 112


>dbj|BAB08885.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 370

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
 Frame = -3

Query: 402 SVKLSGNRNYHLWRRQMLCLLKTYDVYGFVDGSFARPIASTDKLE--KQYNKLVKGWIFC 229
           SV L+G+ NY+ W  +ML  L+     GF+DG+  +P + +   E  K  N ++ GWI  
Sbjct: 44  SVVLNGD-NYNEWSEEMLNALQAKRKTGFIDGTIQKPASDSPDFENWKTVNSMIVGWIRV 102

Query: 228 SVSEGVLGTVIDIKSAEKVWDKLKSFYDPT-------ISSQPAG--KEEQEEIELKKNLC 76
           S+   V  TV  I  A  +WD+L+  +  T       I +Q A   +E Q  I+    LC
Sbjct: 103 SIEPKVKSTVTFISDAHLLWDELRQRFSVTNNVRVHQIKAQLASCRQEGQTVIDYYGRLC 162

Query: 75  KATMKGSWSELK 40
                  W ELK
Sbjct: 163 NL-----WDELK 169


>emb|CAN67528.1| hypothetical protein VITISV_004308 [Vitis vinifera]
          Length = 542

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/106 (30%), Positives = 61/106 (57%), Gaps = 4/106 (3%)
 Frame = -3

Query: 405 VSVKLSGNRNYHLWRRQMLCLLKTYDVYGFVDGSFARPIASTDKLEKQY---NKLVKGWI 235
           + +KL G+ NY LW + +   +   D  G+++G   +P ASTD L +++   N +VKGW+
Sbjct: 45  IIIKLDGS-NYALWSQVVEMFISERDKLGYINGDLPQP-ASTDPLFRRWRIENTIVKGWL 102

Query: 234 FCSVSEGVLGTVIDIKSAEKVWDKLK-SFYDPTISSQPAGKEEQEE 100
             ++   ++ T I   + +KVWD +  +F+D + ++Q    + +EE
Sbjct: 103 INTMDSSLVSTFIFYPTTKKVWDAIAVTFFDESDTAQVYELQRREE 148


>ref|XP_002280329.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 834

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
 Frame = -3

Query: 411 NFVSVKLSGNRNYHLWRRQMLCLLKTYDVYGFVDGSFARPIASTDKLEKQYNK---LVKG 241
           N VS  L+G  NYH WRR ML  L   +  GFVDG+ +RP+ S D +   +N+   ++  
Sbjct: 40  NLVSNLLTG-ANYHTWRRAMLMALTAKNKVGFVDGTISRPM-SHDLIYGAWNRCNSMISS 97

Query: 240 WIFCSVSEGVLGTVIDIKSAEKVWDKLKSFYD 145
           WI  +VS  +  +++ + SA  +W  L   ++
Sbjct: 98  WIINAVSREIADSLLYLDSACDIWKDLNDRFN 129


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