BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049893
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   117   1e-24
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa...   117   1e-24
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...   117   1e-24
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...   117   1e-24
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   116   2e-24

>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group] gi|77548751|gb|ABA91548.1|
            retrotransposon protein, putative, Ty1-copia subclass
            [Oryza sativa Japonica Group]
          Length = 2340

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/97 (57%), Positives = 69/97 (71%)
 Frame = +3

Query: 3    IRYLRTDNRLEFCSGEFNTYYREKGIT*QRTGIHTPQQNGVTERMNHTIMEKVCCKIANS 182
            ++ LRTDN +EFCS  F +Y + +GI    T  HTPQQNGV ERMN TI+ K  C ++N+
Sbjct: 762  VKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNA 821

Query: 183  KLSKSFWAEAFATACYVINCSPSRTIKKKTSIELWSG 293
             L K FWAEA +TACY+IN SPS  I KKT IE+WSG
Sbjct: 822  GLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 858


>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
           gi|18542925|gb|AAL75759.1| Putative pol polyprotein
           [Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 1005

 Score =  117 bits (293), Expect = 1e-24
 Identities = 55/101 (54%), Positives = 73/101 (72%)
 Frame = +3

Query: 3   IRYLRTDNRLEFCSGEFNTYYREKGIT*QRTGIHTPQQNGVTERMNHTIMEKVCCKIANS 182
           ++ LRTDN  EFCS  F+ YYR++GI    T  +TPQQNGV ERMN TI+ K  C ++N+
Sbjct: 285 VKVLRTDNGGEFCSDAFDDYYRKEGIVRHYTIPYTPQQNGVAERMNRTIISKAHCMLSNA 344

Query: 183 KLSKSFWAEAFATACYVINCSPSRTIKKKTSIELWSGRAEE 305
           +++K FWAEA  TACY+IN SPS  + KKT IE+WSG + +
Sbjct: 345 RMNKRFWAEAANTACYLINRSPSIPLNKKTPIEVWSGMSAD 385


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/97 (57%), Positives = 69/97 (71%)
 Frame = +3

Query: 3   IRYLRTDNRLEFCSGEFNTYYREKGIT*QRTGIHTPQQNGVTERMNHTIMEKVCCKIANS 182
           ++ LRTDN +EFCS  F +Y + +GI    T  HTPQQNGV ERMN TI+ K  C ++N+
Sbjct: 555 VKILRTDNGMEFCSKIFKSYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNA 614

Query: 183 KLSKSFWAEAFATACYVINCSPSRTIKKKTSIELWSG 293
            L K FWAEA +TACY+IN SPS  I KKT IE+WSG
Sbjct: 615 GLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 651


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/97 (57%), Positives = 69/97 (71%)
 Frame = +3

Query: 3   IRYLRTDNRLEFCSGEFNTYYREKGIT*QRTGIHTPQQNGVTERMNHTIMEKVCCKIANS 182
           ++ LRTDN +EFCS  F +Y + +GI    T  HTPQQNGV ERMN TI+ K  C ++N+
Sbjct: 521 VKILRTDNGMEFCSKIFKSYCKSEGIVRHYTIPHTPQQNGVAERMNRTIISKARCMLSNA 580

Query: 183 KLSKSFWAEAFATACYVINCSPSRTIKKKTSIELWSG 293
            L K FWAEA +TACY+IN SPS  I KKT IE+WSG
Sbjct: 581 GLPKQFWAEAVSTACYLINRSPSYAIDKKTPIEVWSG 617


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1333

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/97 (55%), Positives = 71/97 (73%)
 Frame = +3

Query: 3   IRYLRTDNRLEFCSGEFNTYYREKGIT*QRTGIHTPQQNGVTERMNHTIMEKVCCKIANS 182
           ++ LRTDN  EFCS  FN Y R++GI    T  HTPQQNGV ERMN TI+ +  C ++++
Sbjct: 547 VKLLRTDNGGEFCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHA 606

Query: 183 KLSKSFWAEAFATACYVINCSPSRTIKKKTSIELWSG 293
           +++K FWAEA +TACY+IN SPS  + KKT IE+WSG
Sbjct: 607 RMNKRFWAEAASTACYLINRSPSIPLNKKTPIEVWSG 643