BLASTX nr result

ID: Atractylodes22_contig00049824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049824
         (407 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...    60   1e-07
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...    60   2e-07
ref|XP_002520430.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06

>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
           max]
          Length = 544

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/63 (52%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
 Frame = +3

Query: 219 TRPRRLSACPRHPSEPVTGFCALCLRDRLAGLDSSSGQ-VEVEKVVATSRRTRGHGVASS 395
           ++  R + C RHPS PVTGFCA CLR+RLAG+DSSS +  E+ +  + S RT      SS
Sbjct: 3   SKTHRFTTCHRHPSTPVTGFCASCLRERLAGIDSSSAESPELRRTKSFSGRTT--DAPSS 60

Query: 396 SAA 404
           SAA
Sbjct: 61  SAA 63


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
           UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 575

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
 Frame = +3

Query: 231 RLSACPRHPSEPVTGFCALCLRDRLAGLDSSS---GQVEVEKVVATSRRTRGHGVASSSA 401
           RLS C RHPS+PVTGFCA CLR+RLAG+D  +     V+     A  RR++ H  A   A
Sbjct: 11  RLSTCHRHPSKPVTGFCASCLRERLAGIDPDTQHESPVQNNHSSAELRRSKSHSAAKCEA 70


>ref|XP_002520430.1| conserved hypothetical protein [Ricinus communis]
           gi|223540272|gb|EEF41843.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 576

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
 Frame = +3

Query: 201 TVTKNRTRPRRLSACPRHPSEPVTGFCALCLRDRLAGLDSSSGQ-VEVEKVVATSRRTRG 377
           TV        R S C RHP+ P+TGFCA CLR+RLAG+D  + Q   +  + A  RR++ 
Sbjct: 2   TVPPKPLHHHRHSTCHRHPTRPITGFCASCLRERLAGIDPDTHQETPITHLAAELRRSKS 61

Query: 378 HGVASS 395
           +  +S+
Sbjct: 62  YSCSSN 67


>ref|XP_002299829.1| predicted protein [Populus trichocarpa] gi|222847087|gb|EEE84634.1|
           predicted protein [Populus trichocarpa]
          Length = 553

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/51 (50%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
 Frame = +3

Query: 231 RLSACPRHPSEPVTGFCALCLRDRLAGLDSSSGQ-VEVEKVVATSRRTRGH 380
           R S+C RHPS+P+TGFCA CLR+RLAG+D  + Q   V  + A  RR++ +
Sbjct: 13  RHSSCNRHPSKPITGFCASCLRERLAGIDPDTHQETPVTHLAAELRRSKSY 63


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