BLASTX nr result

ID: Atractylodes22_contig00049756 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049756
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vini...   182   2e-44
emb|CAN61748.1| hypothetical protein VITISV_014578 [Vitis vinifera]   182   3e-44
ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protei...   181   4e-44
gb|ABF19052.1| gamma-tubulin, partial [Nicotiana tabacum]             181   4e-44
emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]                     181   4e-44

>ref|XP_002276643.1| PREDICTED: tubulin gamma-1 chain [Vitis vinifera]
           gi|297745396|emb|CBI40476.3| unnamed protein product
           [Vitis vinifera]
          Length = 474

 Score =  182 bits (463), Expect = 2e-44
 Identities = 87/108 (80%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 QVALSRKSPYVRTAHRVSGLMLASYTGVRHLFAKCLSQYSMLRKRQAFLDKYKDFPMFAE 144
           QVALSRKSPYV+TAHRVSGLMLAS+T +RHLF+KCLSQY  LRK+QAFLD Y+ FPMFA+
Sbjct: 359 QVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFAD 418

Query: 143 -DLSEFDESKDILDSLVDEYKACESPDYIKWGMEDPDHMLTDEGTDVG 3
            DLSEFDES+DI++SLVDEYKACESPDYIKWGMEDPDH+LT EG   G
Sbjct: 419 NDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEGNASG 466


>emb|CAN61748.1| hypothetical protein VITISV_014578 [Vitis vinifera]
          Length = 492

 Score =  182 bits (461), Expect = 3e-44
 Identities = 86/104 (82%), Positives = 97/104 (93%), Gaps = 1/104 (0%)
 Frame = -2

Query: 323 QVALSRKSPYVRTAHRVSGLMLASYTGVRHLFAKCLSQYSMLRKRQAFLDKYKDFPMFAE 144
           QVALSRKSPYV+TAHRVSGLMLAS+T +RHLF+KCLSQY  LRK+QAFLD Y+ FPMFA+
Sbjct: 367 QVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFAD 426

Query: 143 -DLSEFDESKDILDSLVDEYKACESPDYIKWGMEDPDHMLTDEG 15
            DLSEFDES+DI++SLVDEYKACESPDYIKWGMEDPDH+LT EG
Sbjct: 427 NDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDHILTGEG 470


>ref|XP_002320847.1| tubulin gamma-1 chain, at3g61650-like protein [Populus trichocarpa]
           gi|222861620|gb|EEE99162.1| tubulin gamma-1 chain,
           at3g61650-like protein [Populus trichocarpa]
          Length = 474

 Score =  181 bits (460), Expect = 4e-44
 Identities = 86/108 (79%), Positives = 99/108 (91%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 QVALSRKSPYVRTAHRVSGLMLASYTGVRHLFAKCLSQYSMLRKRQAFLDKYKDFPMFAE 144
           QVALSRKSPYV+TAHRVSGLMLAS+T +RHLF+KCLSQY  LRK+QAFLD Y+ FPMFA+
Sbjct: 359 QVALSRKSPYVQTAHRVSGLMLASHTSIRHLFSKCLSQYEKLRKKQAFLDNYRKFPMFAD 418

Query: 143 -DLSEFDESKDILDSLVDEYKACESPDYIKWGMEDPDHMLTDEGTDVG 3
            DLSEFDES+DI++SLVDEYKACESPDYIKWGMEDPD++LT+EG   G
Sbjct: 419 NDLSEFDESRDIIESLVDEYKACESPDYIKWGMEDPDNLLTEEGNAKG 466


>gb|ABF19052.1| gamma-tubulin, partial [Nicotiana tabacum]
          Length = 464

 Score =  181 bits (460), Expect = 4e-44
 Identities = 86/108 (79%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 QVALSRKSPYVRTAHRVSGLMLASYTGVRHLFAKCLSQYSMLRKRQAFLDKYKDFPMFAE 144
           QVALSRKSPYV+TAHRVSGLMLAS+TG+RHLF+KCLSQY  LRKRQAFLD Y++ P FA+
Sbjct: 349 QVALSRKSPYVQTAHRVSGLMLASHTGIRHLFSKCLSQYDKLRKRQAFLDNYRNHPTFAD 408

Query: 143 -DLSEFDESKDILDSLVDEYKACESPDYIKWGMEDPDHMLTDEGTDVG 3
            DLSEFDES+D+++SLVDEYKACESPDYIKWGMEDPDH+LT EG   G
Sbjct: 409 NDLSEFDESRDVIESLVDEYKACESPDYIKWGMEDPDHVLTGEGNASG 456


>emb|CAC00547.1| gamma tubulin [Nicotiana tabacum]
          Length = 474

 Score =  181 bits (460), Expect = 4e-44
 Identities = 86/108 (79%), Positives = 98/108 (90%), Gaps = 1/108 (0%)
 Frame = -2

Query: 323 QVALSRKSPYVRTAHRVSGLMLASYTGVRHLFAKCLSQYSMLRKRQAFLDKYKDFPMFAE 144
           QVALSRKSPYV+TAHRVSGLMLAS+TG+RHLF+KCLSQY  LRKRQAFLD Y++ P FA+
Sbjct: 359 QVALSRKSPYVQTAHRVSGLMLASHTGIRHLFSKCLSQYDKLRKRQAFLDNYRNHPTFAD 418

Query: 143 -DLSEFDESKDILDSLVDEYKACESPDYIKWGMEDPDHMLTDEGTDVG 3
            DLSEFDES+D+++SLVDEYKACESPDYIKWGMEDPDH+LT EG   G
Sbjct: 419 NDLSEFDESRDVIESLVDEYKACESPDYIKWGMEDPDHVLTGEGNASG 466


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