BLASTX nr result

ID: Atractylodes22_contig00049729 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049729
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27286.3| unnamed protein product [Vitis vinifera]              228   7e-58
ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat...   228   7e-58
ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat...   223   2e-56
ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat...   221   8e-56
ref|NP_173972.1| pentatricopeptide repeat-containing protein [Ar...   220   1e-55

>emb|CBI27286.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  228 bits (580), Expect = 7e-58
 Identities = 103/155 (66%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = +2

Query: 95  PLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYSWKPVFK 274
           P + VNP+HLLRVCT+LYQQQ+SPE RL T L  C+F LTHEFFLQ+CNKFP SW+PV+K
Sbjct: 30  PTSIVNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLTHEFFLQVCNKFPLSWRPVYK 89

Query: 275 FHKFSQTQT-FTHTSITLNRMLDVVGKARNIDLFWDLIKEIGHRRLVTDKTYKIALKTLA 451
           F +F++TQ  F H S+T N+M+DV+G++RNI LFW++++E+G RRL  DKT+ IALKTLA
Sbjct: 90  FFEFTETQPCFHHNSVTFNKMVDVIGRSRNIKLFWEVLQEMGRRRLANDKTFVIALKTLA 149

Query: 452 SAREMKKCVDFFHIMNGFGYGYSLGTLNKVIETLC 556
           S REMKKCV+FFH+MN   YGYSL TLNKV+E LC
Sbjct: 150 SIREMKKCVEFFHLMNAHEYGYSLETLNKVVEVLC 184


>ref|XP_002274259.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Vitis vinifera]
          Length = 525

 Score =  228 bits (580), Expect = 7e-58
 Identities = 103/155 (66%), Positives = 129/155 (83%), Gaps = 1/155 (0%)
 Frame = +2

Query: 95  PLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYSWKPVFK 274
           P + VNP+HLLRVCT+LYQQQ+SPE RL T L  C+F LTHEFFLQ+CNKFP SW+PV+K
Sbjct: 32  PTSIVNPNHLLRVCTVLYQQQNSPEVRLQTHLRACEFHLTHEFFLQVCNKFPLSWRPVYK 91

Query: 275 FHKFSQTQT-FTHTSITLNRMLDVVGKARNIDLFWDLIKEIGHRRLVTDKTYKIALKTLA 451
           F +F++TQ  F H S+T N+M+DV+G++RNI LFW++++E+G RRL  DKT+ IALKTLA
Sbjct: 92  FFEFTETQPCFHHNSVTFNKMVDVIGRSRNIKLFWEVLQEMGRRRLANDKTFVIALKTLA 151

Query: 452 SAREMKKCVDFFHIMNGFGYGYSLGTLNKVIETLC 556
           S REMKKCV+FFH+MN   YGYSL TLNKV+E LC
Sbjct: 152 SIREMKKCVEFFHLMNAHEYGYSLETLNKVVEVLC 186


>ref|XP_003517831.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Glycine max]
          Length = 494

 Score =  223 bits (567), Expect = 2e-56
 Identities = 100/161 (62%), Positives = 130/161 (80%), Gaps = 1/161 (0%)
 Frame = +2

Query: 77  LNTTHNPLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPYS 256
           L   H+ ++PVNP HLLRVCTILYQQQ+SPE RL + L+  +FQLTHEFFLQ+CNKFPYS
Sbjct: 21  LRRHHHHISPVNPDHLLRVCTILYQQQNSPEPRLTSKLASSEFQLTHEFFLQVCNKFPYS 80

Query: 257 WKPVFKFHKFSQTQT-FTHTSITLNRMLDVVGKARNIDLFWDLIKEIGHRRLVTDKTYKI 433
           W+PV++F  ++Q+   FTH+ ++ N+MLDVVGK+RNIDLFWDL+ ++  R  V DKT+ I
Sbjct: 81  WRPVYRFFLYTQSLPHFTHSPVSFNKMLDVVGKSRNIDLFWDLLNDMARRHFVNDKTFVI 140

Query: 434 ALKTLASAREMKKCVDFFHIMNGFGYGYSLGTLNKVIETLC 556
           AL+TL  ARE+KKCV+FFH+MN  G  Y+LGTLNKV+E +C
Sbjct: 141 ALRTLGGARELKKCVEFFHLMNSNGCEYNLGTLNKVVEAMC 181


>ref|XP_004144262.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g26500-like [Cucumis sativus]
          Length = 505

 Score =  221 bits (562), Expect = 8e-56
 Identities = 99/171 (57%), Positives = 137/171 (80%), Gaps = 1/171 (0%)
 Frame = +2

Query: 50  SNAADHTPSLNTTHNPLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFL 229
           S AAD+ P          P++ +HL RVCT+LYQQQ+SP+ +L+T L  C+F L+HEFFL
Sbjct: 32  STAADNIPQ---------PIDSTHLRRVCTVLYQQQNSPDLKLHTKLLACNFNLSHEFFL 82

Query: 230 QICNKFPYSWKPVFKFHKFSQTQ-TFTHTSITLNRMLDVVGKARNIDLFWDLIKEIGHRR 406
           Q+CN FP SW+PV++F +F++T   FTHT+++ N+++DVVGK+RNIDL W LI+E+G RR
Sbjct: 83  QVCNTFPLSWRPVYRFFQFTETHPNFTHTAVSFNKLIDVVGKSRNIDLLWGLIQEMGRRR 142

Query: 407 LVTDKTYKIALKTLASAREMKKCVDFFHIMNGFGYGYSLGTLNKVIETLCG 559
           LV DKT+ +AL+TLA+ARE+KKCV+FFH+MNG+G+ YSL TLN+V+E LCG
Sbjct: 143 LVNDKTFVVALRTLATARELKKCVEFFHLMNGYGFCYSLVTLNRVVEKLCG 193


>ref|NP_173972.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75263259|sp|Q9FZD4.1|PPR59_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At1g26500 gi|9797751|gb|AAF98569.1|AC013427_12
           Contains similarity to a hypothetical protein T12C14_170
           gi|7340718 from Arabidopsis thaliana BAC T12C14
           gb|AL162507 and contains multiple PPR PF|01535 repeats
           [Arabidopsis thaliana] gi|332192576|gb|AEE30697.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 505

 Score =  220 bits (561), Expect = 1e-55
 Identities = 102/163 (62%), Positives = 129/163 (79%), Gaps = 2/163 (1%)
 Frame = +2

Query: 74  SLNTTHNPLTPVNPSHLLRVCTILYQQQDSPESRLYTSLSRCDFQLTHEFFLQICNKFPY 253
           S   T   +TP+N  HLLRVCTILYQQQ+SP+SRL + LS   FQLTHEFFLQ+CN FP 
Sbjct: 30  STELTPTTITPINQDHLLRVCTILYQQQNSPDSRLVSKLSSTKFQLTHEFFLQVCNNFPL 89

Query: 254 SWKPVFKFHKFSQTQ--TFTHTSITLNRMLDVVGKARNIDLFWDLIKEIGHRRLVTDKTY 427
           SW+PV +F  +SQT    FTHTS T N+ML ++G +RN+DLFW+L +EIG R LV DKT+
Sbjct: 90  SWRPVHRFFLYSQTHHPDFTHTSTTSNKMLAIIGNSRNMDLFWELAQEIGKRGLVNDKTF 149

Query: 428 KIALKTLASAREMKKCVDFFHIMNGFGYGYSLGTLNKVIETLC 556
           +I LKTLASARE+KKCV++FH+MNGFGY Y++ T+N+ +ETLC
Sbjct: 150 RIVLKTLASARELKKCVNYFHLMNGFGYLYNVETMNRGVETLC 192


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