BLASTX nr result

ID: Atractylodes22_contig00049603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049603
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608971.1| RING finger protein [Medicago truncatula] gi...    96   3e-18
ref|XP_002511411.1| protein binding protein, putative [Ricinus c...    96   4e-18
ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...    94   1e-17
ref|XP_002318038.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-...    93   2e-17

>ref|XP_003608971.1| RING finger protein [Medicago truncatula]
           gi|355510026|gb|AES91168.1| RING finger protein
           [Medicago truncatula]
          Length = 365

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 44/76 (57%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   NFHVACIDKWLVLNINCPRCRCSVFPNLDLNDLPNIPTDPNRS--STLSTTHHAQSQPIS 176
           NFHV CID+WL LN+ CPRCRCSVFPNLDL+ L N+  D  RS  S ++TT + + QP S
Sbjct: 239 NFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPDSERSSDSVVTTTRYVRGQPSS 298

Query: 177 QSYLSRMQSFLLPIHS 224
           QSYL R+Q  L P+ +
Sbjct: 299 QSYLLRLQGLLRPVRT 314


>ref|XP_002511411.1| protein binding protein, putative [Ricinus communis]
           gi|223550526|gb|EEF52013.1| protein binding protein,
           putative [Ricinus communis]
          Length = 381

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 43/76 (56%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   NFHVACIDKWLVLNINCPRCRCSVFPNLDLNDLPNIPTDPNR--SSTLSTTHHAQSQPIS 176
           NFHV CID+WL LN+ CPRCRCSVFPNLDL+ L N+  DP R  ++ ++T  + ++QP S
Sbjct: 256 NFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRADPERPPAADVTTNRYVRTQPSS 315

Query: 177 QSYLSRMQSFLLPIHS 224
           QSYL R+Q  L PI +
Sbjct: 316 QSYLLRLQGLLRPIRT 331


>ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
           gi|449518937|ref|XP_004166492.1| PREDICTED: E3
           ubiquitin-protein ligase SIS3-like [Cucumis sativus]
          Length = 377

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/76 (56%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
 Frame = +3

Query: 3   NFHVACIDKWLVLNINCPRCRCSVFPNLDLNDLPNIPTDPNR--SSTLSTTHHAQSQPIS 176
           NFHV CID+WL LN+ CPRCRCSVFPNLDL+ L N+ +D +R  +S L+   +  SQP S
Sbjct: 256 NFHVGCIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRSDTDRPSASVLTANRYVGSQPSS 315

Query: 177 QSYLSRMQSFLLPIHS 224
           QSYL R+Q  L P+ +
Sbjct: 316 QSYLVRLQGLLRPVRT 331


>ref|XP_002318038.1| predicted protein [Populus trichocarpa] gi|222858711|gb|EEE96258.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 42/76 (55%), Positives = 55/76 (72%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   NFHVACIDKWLVLNINCPRCRCSVFPNLDLNDLPNIPTDPNRS-STLSTTHHAQSQPISQ 179
           NFHV CID+WL LN+ CPRCRCSVFPNLDL+ + N+  D  RS +T++T  + ++ P S 
Sbjct: 267 NFHVECIDEWLRLNVKCPRCRCSVFPNLDLSAISNLRADSERSPATVTTNRYVRTVPSSH 326

Query: 180 SYLSRMQSFLLPIHSG 227
           SYL R+Q  L P+ SG
Sbjct: 327 SYLLRLQGLLWPVQSG 342


>ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
          Length = 382

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 42/74 (56%), Positives = 53/74 (71%), Gaps = 2/74 (2%)
 Frame = +3

Query: 3   NFHVACIDKWLVLNINCPRCRCSVFPNLDLNDLPNIPTDPNRS--STLSTTHHAQSQPIS 176
           NFHV CID+WL LN+ CPRCRCSVFPNLDL+ L N+  +P  S  S ++TT + + QP S
Sbjct: 256 NFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRAEPEESSASVVTTTRYVRGQPSS 315

Query: 177 QSYLSRMQSFLLPI 218
           QSY  R+Q  L P+
Sbjct: 316 QSYRLRLQGLLRPV 329


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