BLASTX nr result

ID: Atractylodes22_contig00049598 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049598
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515072.1| pentatricopeptide repeat-containing protein,...   311   9e-83
ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|2...   306   2e-81
ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containi...   295   7e-78
ref|XP_003614316.1| Pentatricopeptide repeat-containing protein ...   288   9e-76
ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containi...   287   1e-75

>ref|XP_002515072.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545552|gb|EEF47056.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 504

 Score =  311 bits (796), Expect = 9e-83
 Identities = 146/195 (74%), Positives = 175/195 (89%)
 Frame = +1

Query: 82  MSIRWPRVLTPTYLSQLIRSQKNSLKALHIFNEARNKYPNYRHNGLVYATMINILGTSDR 261
           M++RWPR+LTPT+LSQ+IR+QKN L AL IF EA++KYPNYRHNG VYATMI ILG+S R
Sbjct: 1   MTVRWPRLLTPTHLSQIIRNQKNPLIALRIFKEAKDKYPNYRHNGPVYATMIGILGSSGR 60

Query: 262 IVDMKQVIDQMKEDSCECQDSVFSSAIKTYAKAGMLNEAISLFKNLHQFNCVNWTESFNT 441
           I +MK+V+DQM+EDSCEC+DS+F++AIKTYA+ G+LNEAISLFKN+ QFNCVNWTESFNT
Sbjct: 61  ITEMKEVLDQMREDSCECKDSIFANAIKTYARVGLLNEAISLFKNIPQFNCVNWTESFNT 120

Query: 442 MLQIMVKESKLESAHRLFLENFSRWEVKSRTRSLSWLIDILCQKKRSDLALQVFQEMNYQ 621
           +LQIMVKESKLE+AHRLFLE+   WEVKSR RSL+ L+D+LCQ  RSD+ALQVFQEMNYQ
Sbjct: 121 LLQIMVKESKLEAAHRLFLESSYGWEVKSRVRSLNLLMDVLCQHNRSDVALQVFQEMNYQ 180

Query: 622 YCYPTRDTYRILMRG 666
            CYP RD+YRI+M G
Sbjct: 181 GCYPDRDSYRIVMMG 195


>ref|XP_002301440.1| predicted protein [Populus trichocarpa] gi|222843166|gb|EEE80713.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  306 bits (785), Expect = 2e-81
 Identities = 143/195 (73%), Positives = 173/195 (88%)
 Frame = +1

Query: 82  MSIRWPRVLTPTYLSQLIRSQKNSLKALHIFNEARNKYPNYRHNGLVYATMINILGTSDR 261
           MSIRWPR+LTPT LSQ++RSQKN L AL IF +A++KYP+Y HNG VYATMI+ILG SDR
Sbjct: 1   MSIRWPRLLTPTQLSQILRSQKNPLTALQIFKDAKDKYPSYHHNGPVYATMISILGNSDR 60

Query: 262 IVDMKQVIDQMKEDSCECQDSVFSSAIKTYAKAGMLNEAISLFKNLHQFNCVNWTESFNT 441
           I +MK+VIDQM++DSCEC+DSVF +AIKTYA AG ++EA+SLFKN+ +FNCVNWTESFNT
Sbjct: 61  IAEMKEVIDQMRDDSCECKDSVFVTAIKTYASAGQISEAVSLFKNIPKFNCVNWTESFNT 120

Query: 442 MLQIMVKESKLESAHRLFLENFSRWEVKSRTRSLSWLIDILCQKKRSDLALQVFQEMNYQ 621
           +LQI+VKESKLE+AHR FLEN   WEVKSR R+L+ L+D+LCQ+ RSDLALQ+FQEM+YQ
Sbjct: 121 LLQILVKESKLETAHRFFLENSCGWEVKSRIRALNLLLDVLCQRNRSDLALQIFQEMDYQ 180

Query: 622 YCYPTRDTYRILMRG 666
            CYP RD+YRILMRG
Sbjct: 181 GCYPNRDSYRILMRG 195


>ref|XP_003534128.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Glycine max]
          Length = 502

 Score =  295 bits (754), Expect = 7e-78
 Identities = 140/195 (71%), Positives = 172/195 (88%)
 Frame = +1

Query: 82  MSIRWPRVLTPTYLSQLIRSQKNSLKALHIFNEARNKYPNYRHNGLVYATMINILGTSDR 261
           MSIRWPRVLTPTYLSQ+I++QKN LKAL+IFNEA+++YPNY HNG VYATMI+ILGTS R
Sbjct: 1   MSIRWPRVLTPTYLSQIIKTQKNPLKALNIFNEAKSRYPNYYHNGPVYATMISILGTSGR 60

Query: 262 IVDMKQVIDQMKEDSCECQDSVFSSAIKTYAKAGMLNEAISLFKNLHQFNCVNWTESFNT 441
           + +M+ VI+QMKEDSCEC+DSVF S IKTYA AG+++EAISL+K++ +FNCVNWTESFNT
Sbjct: 61  LNEMRDVIEQMKEDSCECKDSVFVSVIKTYANAGLVDEAISLYKSIPRFNCVNWTESFNT 120

Query: 442 MLQIMVKESKLESAHRLFLENFSRWEVKSRTRSLSWLIDILCQKKRSDLALQVFQEMNYQ 621
           MLQIMVKE++LE AHRLF+E+   WEV+S  R+L+ L+  LCQK RSDLALQ+FQEM+YQ
Sbjct: 121 MLQIMVKENRLEIAHRLFVESSCGWEVRSLVRALNLLMYALCQKSRSDLALQLFQEMDYQ 180

Query: 622 YCYPTRDTYRILMRG 666
            CYP RD+Y ILM+G
Sbjct: 181 SCYPNRDSYAILMKG 195


>ref|XP_003614316.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355515651|gb|AES97274.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 504

 Score =  288 bits (736), Expect = 9e-76
 Identities = 136/195 (69%), Positives = 167/195 (85%)
 Frame = +1

Query: 82  MSIRWPRVLTPTYLSQLIRSQKNSLKALHIFNEARNKYPNYRHNGLVYATMINILGTSDR 261
           MSIRWPRVL PTYL+Q+IR+QKN LKAL IFNEA+ KYP Y HNG VYATMINILGTS R
Sbjct: 3   MSIRWPRVLNPTYLTQIIRTQKNPLKALEIFNEAKLKYPKYSHNGPVYATMINILGTSGR 62

Query: 262 IVDMKQVIDQMKEDSCECQDSVFSSAIKTYAKAGMLNEAISLFKNLHQFNCVNWTESFNT 441
           + +M  +I+QMKEDSCEC+DSVF SAIKTYAK G+++EAISL+KN+ QFNCVNWT+SFNT
Sbjct: 63  LKEMSDLIEQMKEDSCECKDSVFVSAIKTYAKEGLVDEAISLYKNIPQFNCVNWTQSFNT 122

Query: 442 MLQIMVKESKLESAHRLFLENFSRWEVKSRTRSLSWLIDILCQKKRSDLALQVFQEMNYQ 621
           +L+IMV E+KLE AH LF+E+   WEVKSR ++L+ L+  LC+K RSDLALQ+FQEM+YQ
Sbjct: 123 LLEIMVNENKLEDAHSLFVESSCGWEVKSRVQALNLLMYALCRKSRSDLALQIFQEMDYQ 182

Query: 622 YCYPTRDTYRILMRG 666
            CYP R++Y I+M+G
Sbjct: 183 GCYPNRESYLIVMKG 197


>ref|XP_002268415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g05600-like [Vitis vinifera]
          Length = 503

 Score =  287 bits (734), Expect = 1e-75
 Identities = 138/195 (70%), Positives = 167/195 (85%)
 Frame = +1

Query: 82  MSIRWPRVLTPTYLSQLIRSQKNSLKALHIFNEARNKYPNYRHNGLVYATMINILGTSDR 261
           MS++WPR L PT LSQ+IR+QKN L AL IFNEA++K+PNYRHNG VYATMIN+LG+S R
Sbjct: 1   MSVKWPRFLIPTQLSQMIRTQKNPLTALKIFNEAKSKFPNYRHNGPVYATMINVLGSSGR 60

Query: 262 IVDMKQVIDQMKEDSCECQDSVFSSAIKTYAKAGMLNEAISLFKNLHQFNCVNWTESFNT 441
           I +M++VIDQMK+DSCEC+DSVFSS +KTYA+AGM++EA+SLFK L QFNCVNWT SFNT
Sbjct: 61  IAEMREVIDQMKQDSCECKDSVFSSVMKTYARAGMVDEAVSLFKTLPQFNCVNWTGSFNT 120

Query: 442 MLQIMVKESKLESAHRLFLENFSRWEVKSRTRSLSWLIDILCQKKRSDLALQVFQEMNYQ 621
           +L+I+VKESKLE+A RLFLE+   WEVKSR  SL+ L+D LCQ  RSDLAL VFQEM YQ
Sbjct: 121 LLRILVKESKLETACRLFLEHSCGWEVKSRIGSLNLLMDALCQINRSDLALHVFQEMRYQ 180

Query: 622 YCYPTRDTYRILMRG 666
            C P +++YRILMRG
Sbjct: 181 CCSPDKESYRILMRG 195


Top