BLASTX nr result

ID: Atractylodes22_contig00049594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes22_contig00049594
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABM55246.1| integrase [Beta vulgaris]                              135   4e-30
emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vu...   133   2e-29
emb|CBJ20670.1| hypothetical protein [Beta vulgaris subsp. marit...   132   3e-29
ref|XP_002451986.1| hypothetical protein SORBIDRAFT_04g012210 [S...   128   4e-28
gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subc...   125   5e-27

>gb|ABM55246.1| integrase [Beta vulgaris]
          Length = 297

 Score =  135 bits (339), Expect = 4e-30
 Identities = 66/91 (72%), Positives = 74/91 (81%)
 Frame = +1

Query: 1   RQPDMNIIRCMWIFKHKTRSDGSLERYKARLVCDGRSQQVGVDCDETFSPVVKPATIRTV 180
           R  + NIIR MWIF HK +S GS ERYKARLV DG++QQVG+DC ETFSPVVKPA IR V
Sbjct: 21  RPTNANIIRSMWIFAHKEKSIGSFERYKARLVGDGKTQQVGIDCGETFSPVVKPAIIRLV 80

Query: 181 LSIALSHQWAINQLDVKNAFLHGHLVETVYM 273
           LSIALS  W ++Q+DVKNAFLHG L ETVYM
Sbjct: 81  LSIALSKSWLLHQVDVKNAFLHGELNETVYM 111


>emb|CAA78285.1| unnamed protein product [Beta vulgaris subsp. vulgaris]
           gi|54606703|dbj|BAD66726.1| orf167b [Beta vulgaris
           subsp. vulgaris] gi|54606747|dbj|BAD66770.1| orf167b
           [Beta vulgaris subsp. vulgaris]
          Length = 167

 Score =  133 bits (334), Expect = 2e-29
 Identities = 64/81 (79%), Positives = 69/81 (85%)
 Frame = +1

Query: 31  MWIFKHKTRSDGSLERYKARLVCDGRSQQVGVDCDETFSPVVKPATIRTVLSIALSHQWA 210
           MWIF+HK + DGS ER+KARLV DG  QQVGVDC ETFSPVVKPATIRTVLS+ALS  W 
Sbjct: 1   MWIFRHKKKDDGSFERHKARLVGDGAGQQVGVDCGETFSPVVKPATIRTVLSLALSKSWP 60

Query: 211 INQLDVKNAFLHGHLVETVYM 273
           I+QLDVKNAFLHG L ETVYM
Sbjct: 61  IHQLDVKNAFLHGELKETVYM 81


>emb|CBJ20670.1| hypothetical protein [Beta vulgaris subsp. maritima]
          Length = 167

 Score =  132 bits (332), Expect = 3e-29
 Identities = 63/81 (77%), Positives = 69/81 (85%)
 Frame = +1

Query: 31  MWIFKHKTRSDGSLERYKARLVCDGRSQQVGVDCDETFSPVVKPATIRTVLSIALSHQWA 210
           MWIF+HK + DGS ER+KARLV DG  QQVGVDC ETFSPVVKPAT+RTVLS+ALS  W 
Sbjct: 1   MWIFRHKKKDDGSFERHKARLVGDGAGQQVGVDCGETFSPVVKPATLRTVLSLALSKSWP 60

Query: 211 INQLDVKNAFLHGHLVETVYM 273
           I+QLDVKNAFLHG L ETVYM
Sbjct: 61  IHQLDVKNAFLHGELKETVYM 81


>ref|XP_002451986.1| hypothetical protein SORBIDRAFT_04g012210 [Sorghum bicolor]
           gi|241931817|gb|EES04962.1| hypothetical protein
           SORBIDRAFT_04g012210 [Sorghum bicolor]
          Length = 786

 Score =  128 bits (322), Expect = 4e-28
 Identities = 62/90 (68%), Positives = 72/90 (80%)
 Frame = +1

Query: 1   RQPDMNIIRCMWIFKHKTRSDGSLERYKARLVCDGRSQQVGVDCDETFSPVVKPATIRTV 180
           R P  N++   WIFKHK +SDGSLERYKAR V  G +Q+ GVD DETFSPVVKPAT+RTV
Sbjct: 388 RPPRANVVTGKWIFKHKLQSDGSLERYKARWVLRGFTQRPGVDFDETFSPVVKPATVRTV 447

Query: 181 LSIALSHQWAINQLDVKNAFLHGHLVETVY 270
           LS+AL+  W I+QLDVKNAFLHG+L ET Y
Sbjct: 448 LSLALTRHWPIHQLDVKNAFLHGNLTETFY 477


>gb|ABA97658.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1597

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/90 (66%), Positives = 72/90 (80%)
 Frame = +1

Query: 1    RQPDMNIIRCMWIFKHKTRSDGSLERYKARLVCDGRSQQVGVDCDETFSPVVKPATIRTV 180
            R    N++   WIFKHK +SDG+L+RYKAR V  G SQ++G+D DETFSPVVKPAT+RTV
Sbjct: 1117 RPSGANVVTGKWIFKHKFQSDGTLDRYKARWVLRGFSQRLGIDFDETFSPVVKPATVRTV 1176

Query: 181  LSIALSHQWAINQLDVKNAFLHGHLVETVY 270
            LS+A+S  W I+QLDVKNAFLHG L ETVY
Sbjct: 1177 LSLAVSRDWPIHQLDVKNAFLHGTLQETVY 1206


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